| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1711 |
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| Symbol | |
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| ID | 6375398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1852499 |
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| End bp | 1853833 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642684204 |
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| Product | WD40 domain protein beta Propeller |
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| Protein accession | YP_001960110 |
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| Protein GI | 189500640 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000750977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000915698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATACCTA TGAAAAGCCC TCTTATGCCG TTTTCGAAAA TCGTATTCAT TCTCCTGTGC
TGTTTTGCTC TCATGCCGTC TTCGCTTTTC GGCGAACCGG TGAAGGAATA TATCAAAATT
ACCAAGGCAG GCGCCGACAG GATTCCCCTT GTGTTGCGGT CTGTTGATGT TGAGAGGAGC
AAAGACGCTC AGTACGCAAA CGGAATCGAC AGGGTTATCA AAAACGGACT TGAGTTTTCC
GGTCTGTTCG CCATACTCAA TTCCCCTATG AACCTGATCT CCGGCGGGAA TATCTACCAG
ACCGGAAAAA GACAGATTAA TTTTCCTGCG CTCAGTTCTG TCGGTGCTGA GGTCTATGCA
GGAGGTGTTC TGAAACGGAA AGGCAATACC CTGCACATGG ATATGGAGGT CTATGACGCG
TTGACGGGTA AACTGCTGAT GCGCAAACTT TACGAGGGAA AAAGAGAGGA TACGCGTTCA
CTTGGCCACC GTTTTTGCGA TGACCTTGTC AGATTGTTTA CCGGTAAACC TTCTATTTTC
GGAAGCAAAA TCGCTTACGT TTCCCGAAGA AACGGAAAAA AAGAGATATA CCTTGCTGAT
TTTGACGGTT ACGGTGAAGT TCCTGTAACC AGGACCGGAG GGCTTGCCCT CACTCCGGCG
CTCTCTTCTG ACGGGAGCCA GCTGGCTTAT CTGACCTATA CCAGAGGCAG ACCTGATCTG
CAGATAAAGG ATCTTTCAAA AAAAACCGTG GTTTCCGTTA CGAGGAAAGG TGTTAAAATT
GATCCTGCCT GGCGAAAAGG CTCGACGGAA CTTGCGACTA CATTTTCTTT TGACGGCAAT
CAGGAGATCT ATCTTGTGCG AAAAAACGGT TCAATAGTAC GCCGTTTGAC GAGAGACCGA
GGGATTGATC TTTCACCCTC CTTCTCTCCG GACGGAAGAT ATATGGCGTT TGTTTCATCA
AGACACGGAC TCCCTCAGGT GTTCATTATG GACTTGAATT CAGGGTCAAC AAAACGTCTG
ACCTTCAAGG GAAAGTATAA TACACAACCG GCCTGGTCCC CAGTAAATGA TAAAATTGCA
TTTACTACTA TGCAAAAGAA CGGGGAAATA GATATATTTA CAGTAAATGC AGACGGAACC
GGGCTGAAGC AGCTTACGTA CAGAGCGCGT CAAAATGAAG CGCCGAGCTG GTCTCCTGAT
GGAACTATGA TTGTTTTCAG TTCATCCCGA GGCGGAGCAA GCAAGTTGTA TGTTATGAAC
GCTGACGGCA GGAACCAGAG AAGTCTCAAA CTGGCGGGAG AACAAATGCA GCCCTGTTGG
TCTTCATTTA GATGA
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| Protein sequence | MIPMKSPLMP FSKIVFILLC CFALMPSSLF GEPVKEYIKI TKAGADRIPL VLRSVDVERS
KDAQYANGID RVIKNGLEFS GLFAILNSPM NLISGGNIYQ TGKRQINFPA LSSVGAEVYA
GGVLKRKGNT LHMDMEVYDA LTGKLLMRKL YEGKREDTRS LGHRFCDDLV RLFTGKPSIF
GSKIAYVSRR NGKKEIYLAD FDGYGEVPVT RTGGLALTPA LSSDGSQLAY LTYTRGRPDL
QIKDLSKKTV VSVTRKGVKI DPAWRKGSTE LATTFSFDGN QEIYLVRKNG SIVRRLTRDR
GIDLSPSFSP DGRYMAFVSS RHGLPQVFIM DLNSGSTKRL TFKGKYNTQP AWSPVNDKIA
FTTMQKNGEI DIFTVNADGT GLKQLTYRAR QNEAPSWSPD GTMIVFSSSR GGASKLYVMN
ADGRNQRSLK LAGEQMQPCW SSFR
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