Gene Cphamn1_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1701 
Symbol 
ID6375388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1843356 
End bp1844867 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content47% 
IMG OID642684194 
Productamine oxidase 
Protein accessionYP_001960100 
Protein GI189500630 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID[TIGR02730] carotene isomerase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00066646 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTATT CTGCTGATGT TCTCATTGTC GGCGCCGGTA TTGGCGGCTT GACAGCAGCG 
GCCCTTCTTC AGGAAAGGGG TTTTTCAACG CTTACGCTTG AAAAAAACAG CTATCCCGGT
GGAAGCTGTG CTTCATTCAG GCACAAGGGA TATACGTTTG ATGCCGGGGC TTCTGTTTTT
TATGGTTTCT CCGACAGCCA GGAGAGTGGG ACGCTCAATC TTCATACGAG GATATTTGAT
CGGCTTGGTG TCAATGTCCC GACAATTCCT GATCCGGTAC AAATTCATTT TCACATGCCG
GAGGGTTTTG ATGTGCCGGT TTTTTATGAA AGGGATAAGT ATCTTGGTGT TCTTATAAAA
CGCTTTCCCC ATGAAGAGTC GGGTATACGG GCATTTTATG GTGAACTGGA GTCGGTTTAT
GAAATTCTTA GCGCCCTGCC TGCTGGTTCT CTTGAAGATC TTGCACATGT GATGCAGGTT
GGAACAAGGC ATCTTGGCAA AACAATGTCA CTTGCGTGGA AAACCTTTTT GTCAATGGGC
GAGACAGCGA GAAAATATAT CAGTGACGAG GAGTTGCTGA AATTTATTGA TATGGAAGCG
TATTCATGGG CTGTACAGGA TGCGGTTTCG ACACCTCTGG TCAATGCGGG GATTTGTCTC
GCAGATCGTC ATCATGGAGG TATCAACTAT CCCGTAGGAG GCTCTGGTGC TATTCCTGAA
GCATTATGTG AAGGCATAAG AAAGTTCGGT GGTGCAGTGG AATTCGGATG CGATGTTGAG
GAGATTCTTT TGGAAAATGG CGCGGCCCAG GGGGTAAGGC TGAGTGACGG CCAGGTATTT
ACGGCTAAAG CGGTTATATC CAATGCTACG GTATGGGATA CATTCAATCG TCTTGTAAAG
AGTCCCCGTT TCCAGGTTTC CGAAAAAAGG TTTCTTCGTG CTCCAAGCTG GTTTCAGCTT
TACCTTGGCG TTGATGCTTC TGTCATTCCT GATGGCTTTC ATGTTCACCA TATTCTTGTC
GATGACTGGG CTCATTACAA TGAGCCTGGT GGCACTATCT ATTTTTCAGC GCCATCAGTT
CTCGACCCTT CACTTGCTCC GAAAGGAAAA CATGTGGTGC ATGTGTTTGT TACGGATGAA
GCAGATCGCT GGAGCGAGCA TGCCAGAGAG GATAAACAGT ATAAACAAGC CAAAGAGTAT
TATGGTGCTT CGGTGATCAA GAGGACTGAG AAAATTCTAC CTGGATTGTC AGATGCTGTT
GAGGTAAAAT TGCTCGCGAC GCCCTTAACC CATGAAAAAT ATCTTAATCG TTATAAAGGC
TCATATGGCC CACTCCTTCA TCCAGGCCAG AATGTTTTGC TGAAACCCCA GAACCGTACG
GCGGTAAAAG ATCTCTATGC CGCGGGGGAC AGTACGTTCC CTGGTCAGGG AGTTATTGCA
GTAACCTACT CAGGTGTTTC CTGCGCATCC TATATAGCAA GAAAAATGGG GAACCCTCTG
GATTATCTGT AG
 
Protein sequence
MAYSADVLIV GAGIGGLTAA ALLQERGFST LTLEKNSYPG GSCASFRHKG YTFDAGASVF 
YGFSDSQESG TLNLHTRIFD RLGVNVPTIP DPVQIHFHMP EGFDVPVFYE RDKYLGVLIK
RFPHEESGIR AFYGELESVY EILSALPAGS LEDLAHVMQV GTRHLGKTMS LAWKTFLSMG
ETARKYISDE ELLKFIDMEA YSWAVQDAVS TPLVNAGICL ADRHHGGINY PVGGSGAIPE
ALCEGIRKFG GAVEFGCDVE EILLENGAAQ GVRLSDGQVF TAKAVISNAT VWDTFNRLVK
SPRFQVSEKR FLRAPSWFQL YLGVDASVIP DGFHVHHILV DDWAHYNEPG GTIYFSAPSV
LDPSLAPKGK HVVHVFVTDE ADRWSEHARE DKQYKQAKEY YGASVIKRTE KILPGLSDAV
EVKLLATPLT HEKYLNRYKG SYGPLLHPGQ NVLLKPQNRT AVKDLYAAGD STFPGQGVIA
VTYSGVSCAS YIARKMGNPL DYL