Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1699 |
Symbol | |
ID | 6375386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1841351 |
End bp | 1842046 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642684192 |
Product | succinate dehydrogenase and fumarate reductase iron-sulfur protein |
Protein accession | YP_001960098 |
Protein GI | 189500628 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000660591 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGTATC CCGTAGTAAT TTTGCGATTT GATCCTGAAA AAGACGCTCA CCCGCACTAT CAGGAATTTA TTGTTGACAC AGCCCCGCAT GAAAGAGTAC TTGATGTATT GCTGAAGATC AAGTCTGAAC AGGACAGCAC ACTTGGATTG AGAAAATCCT GCGGACACGG AGTATGCGGA AGTGACGCAA TGCTCATAAA CGGTGAAAAC CGGCTCGCAT GCTCAACACT GGTCAGGGAT CTGAAAAGCA ACCGGATCAA GGTAGAGCCT CTTCCGGGAG CATCCATCGT AAAAGACCTT ATCATCGACA CTGATGCTTT CTGGACAAAA TATCAGGAAG TTATGCCCTA TCTGGTCAAT GACGAAGCTC CACCGGACAG AGAACGGCTG CAACGTCCGG AGGAGCACGA GATGATCGAG GAATCTACCA GATGTATTCT GTGTGGCGCC TGTTCACACG CGTGCCCCAC CTCATGGGCA AACGATAGCT ATCTGGGGCC TGCTGCCCTT CTGAAAGCCT ACAGGTTTAT TTTCGATTCC CGTGATCATG CCGACCAGGA ACGTCTCAGA AAAGTCACTT CAGATCATGG GATATGGAAA TGTTATACAG CATACAATTG TGTTGAAGCC TGTCCTAAAG ATATCGATAT AACCTGGCAC ATTACCCGAT TGAAAAAAGC GTCACTCGGC CTCTGA
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Protein sequence | MEYPVVILRF DPEKDAHPHY QEFIVDTAPH ERVLDVLLKI KSEQDSTLGL RKSCGHGVCG SDAMLINGEN RLACSTLVRD LKSNRIKVEP LPGASIVKDL IIDTDAFWTK YQEVMPYLVN DEAPPDRERL QRPEEHEMIE ESTRCILCGA CSHACPTSWA NDSYLGPAAL LKAYRFIFDS RDHADQERLR KVTSDHGIWK CYTAYNCVEA CPKDIDITWH ITRLKKASLG L
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