Gene Cphamn1_1695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1695 
Symbol 
ID6375382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1835180 
End bp1836148 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content50% 
IMG OID642684189 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001960095 
Protein GI189500625 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000898255 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGAAATA TACTGGAAGT AAAAAACCTC AGAACCTACT ACTCGACTGA CAGCGGAACA 
GCAAAAGCGG TTGATGGGGT CAGCTTTTCT CTTGGACGCA ATCGCACCCT GGGGATCGTT
GGAGAGTCAG GATGCGGGAA ATCAGTGACA GCGTTATCGA TTATGCGTCT TGTTCCCATG
CCTCCGGGGT ATTTTGCCGG GGGCGAAATT CTCTGGAATG GTCAGGATCT TCTCAAGCTT
TCTGAAGAAC AGATGAGGAG GTTGAGAGGA AATGATATCG CTATGATATT TCAGGAACCG
ATGAGTTCCC TCAATCCTGT ATACACCTGT GGATACCAGA TAATTGAACA GATATCTCTG
CATCGGGATG TTTCAAAAAA AGAGGCGAAG GAGCAGGCTG TAGAGATGCT TCGTCTTGTC
GGTATTCCCA ATCCTTCGGA ACGTTTCGAT TCCTATCCGC ACGAACTGTC GGGAGGAATG
CGGCAGCGTG TGATGATCGC CATGGCGTTG TCGTGCGATC CTGCGTTGCT TATAGCCGAT
GAACCGACTA CTGCGCTCGA TGTCACCGTT CAGGCACAGA TACTTGAGCT TATAGGCAAG
CTTCAGGGGG TCACGGGAAT GAGTGTAATC ATCATTACGC ACGATTTCGG AGTGATTGCC
GAGTTGTGTG AAGATGTTCT GGTCATGTAT GCGTCAAAAG TCGTGGAAGA CGGTAGTGTG
GCCGACATTT TTTCCAACCC GCTCCATCCC TATACTGCCG GACTGCTGCG ATCGATTCCA
CGGATCGGTT CGAAAAAAGA GCGCCTCAAT GTCATTGAGG GAAATGTGCC CAGCGCTACC
CGACTTCCTG AAGGATGCAG CTTTGCCAAT AGATGTCCTC TTGCTGACCG TCATTGTCAC
GAATTCGACC CGGAGCTGAA GGAGTATGAG GCCGGTCATC GTGCGGCTTG CTGGAAAATT
CAGGTATGA
 
Protein sequence
MRNILEVKNL RTYYSTDSGT AKAVDGVSFS LGRNRTLGIV GESGCGKSVT ALSIMRLVPM 
PPGYFAGGEI LWNGQDLLKL SEEQMRRLRG NDIAMIFQEP MSSLNPVYTC GYQIIEQISL
HRDVSKKEAK EQAVEMLRLV GIPNPSERFD SYPHELSGGM RQRVMIAMAL SCDPALLIAD
EPTTALDVTV QAQILELIGK LQGVTGMSVI IITHDFGVIA ELCEDVLVMY ASKVVEDGSV
ADIFSNPLHP YTAGLLRSIP RIGSKKERLN VIEGNVPSAT RLPEGCSFAN RCPLADRHCH
EFDPELKEYE AGHRAACWKI QV