Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1695 |
Symbol | |
ID | 6375382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1835180 |
End bp | 1836148 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684189 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001960095 |
Protein GI | 189500625 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000898255 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGAAATA TACTGGAAGT AAAAAACCTC AGAACCTACT ACTCGACTGA CAGCGGAACA GCAAAAGCGG TTGATGGGGT CAGCTTTTCT CTTGGACGCA ATCGCACCCT GGGGATCGTT GGAGAGTCAG GATGCGGGAA ATCAGTGACA GCGTTATCGA TTATGCGTCT TGTTCCCATG CCTCCGGGGT ATTTTGCCGG GGGCGAAATT CTCTGGAATG GTCAGGATCT TCTCAAGCTT TCTGAAGAAC AGATGAGGAG GTTGAGAGGA AATGATATCG CTATGATATT TCAGGAACCG ATGAGTTCCC TCAATCCTGT ATACACCTGT GGATACCAGA TAATTGAACA GATATCTCTG CATCGGGATG TTTCAAAAAA AGAGGCGAAG GAGCAGGCTG TAGAGATGCT TCGTCTTGTC GGTATTCCCA ATCCTTCGGA ACGTTTCGAT TCCTATCCGC ACGAACTGTC GGGAGGAATG CGGCAGCGTG TGATGATCGC CATGGCGTTG TCGTGCGATC CTGCGTTGCT TATAGCCGAT GAACCGACTA CTGCGCTCGA TGTCACCGTT CAGGCACAGA TACTTGAGCT TATAGGCAAG CTTCAGGGGG TCACGGGAAT GAGTGTAATC ATCATTACGC ACGATTTCGG AGTGATTGCC GAGTTGTGTG AAGATGTTCT GGTCATGTAT GCGTCAAAAG TCGTGGAAGA CGGTAGTGTG GCCGACATTT TTTCCAACCC GCTCCATCCC TATACTGCCG GACTGCTGCG ATCGATTCCA CGGATCGGTT CGAAAAAAGA GCGCCTCAAT GTCATTGAGG GAAATGTGCC CAGCGCTACC CGACTTCCTG AAGGATGCAG CTTTGCCAAT AGATGTCCTC TTGCTGACCG TCATTGTCAC GAATTCGACC CGGAGCTGAA GGAGTATGAG GCCGGTCATC GTGCGGCTTG CTGGAAAATT CAGGTATGA
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Protein sequence | MRNILEVKNL RTYYSTDSGT AKAVDGVSFS LGRNRTLGIV GESGCGKSVT ALSIMRLVPM PPGYFAGGEI LWNGQDLLKL SEEQMRRLRG NDIAMIFQEP MSSLNPVYTC GYQIIEQISL HRDVSKKEAK EQAVEMLRLV GIPNPSERFD SYPHELSGGM RQRVMIAMAL SCDPALLIAD EPTTALDVTV QAQILELIGK LQGVTGMSVI IITHDFGVIA ELCEDVLVMY ASKVVEDGSV ADIFSNPLHP YTAGLLRSIP RIGSKKERLN VIEGNVPSAT RLPEGCSFAN RCPLADRHCH EFDPELKEYE AGHRAACWKI QV
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