Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1690 |
Symbol | |
ID | 6375377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1829890 |
End bp | 1830444 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642684184 |
Product | NUDIX hydrolase |
Protein accession | YP_001960090 |
Protein GI | 189500620 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000764223 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACATCT ATAAATATTG CCCCTCTTGC GGCACCCCGC TGAAAACAGC GACAATAGAA AATCGCACAA GGAAAACCTG TCCATCCTGT TCCTGGATCC ACTATGAAAA CCCGCTGCCT GTAGCTTTGG CGTATACAGT AAACCAGTCC GGGAAACTGC TCGTTGTCAG GCGAGCCCAT CCTCCCGCCT ATAATGCATG GGCTCTTCCC GGTGGGTTTA TCGAGTCCGG AGAAACTCCA CAGGAGGGTT GTCTGCGGGA ACTGCGGGAG GAAACGTCAC TGAACGGCAG AATCGACCGT CTGATCGGCG CCTACCATCG GGAATCGGAA ATGTACGGTT CTCTGCTTGC TGTGGCTTAT AAGGTGATTG TCAGTGAGGA AACACTTCAG ATAAACCATG AACTCTACGA AGCAGATTTT TATCCCTTTG AGGAGATACC CAGGATAACC ATTCCGCTGC ATCAAAAAGT TATACATGAT GCCCGGGATC ATGAGTCTCA AAAATCTGAG GAAAACATCC CTTCCTTTCC TGTTCGTTCC GGAAGAATCA CGTAA
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Protein sequence | MNIYKYCPSC GTPLKTATIE NRTRKTCPSC SWIHYENPLP VALAYTVNQS GKLLVVRRAH PPAYNAWALP GGFIESGETP QEGCLRELRE ETSLNGRIDR LIGAYHRESE MYGSLLAVAY KVIVSEETLQ INHELYEADF YPFEEIPRIT IPLHQKVIHD ARDHESQKSE ENIPSFPVRS GRIT
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