| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1665 |
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| Symbol | |
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| ID | 6375351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1795768 |
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| End bp | 1797186 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642684159 |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_001960065 |
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| Protein GI | 189500595 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.104935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA ATAGGTATAG CCGGAAGACG CGGCAGTTAA TCGTGGCGTG TGCAGTGGTG
GCCGGAATGG CATTGCCAAA GGACGCTGAT GCGGTGGCAG ACAATTCAGT GCAGTCGGTT
GTTGAGCATA CGATCAACGG CAATCCCGAG GTGCAGGCAA AGTGGCACGA GTTTATGGCA
GCGAACTATG AGGAGGACGT CGCCTATGGC GGGTATTTCC CGAAGCTCGA CGCGTCGGCT
GGTATCGGCC GAGAGTGGAA CTATCAGGAA AGCATCCCGA ACAAGGATGT CTACACCCGC
AAGGGAGTTC GTCTTGAACT GAAGCAGATG CTGTTTGACG GATTGTACAC GCATCATCAG
GTGTGCCGTC TGAAGTGCCG CGGCAAGGCG CTGTATTTCG AGTTTCTGCA GTCGATGGAG
AGCGCCGGCC TTGAGGCGTT GCGTGCGTAT GCCGACGTGC AGCGGTACCG AAACCTTGTG
CGCCTCGCGG AACAGAACTA CTCGTATCAT CAGGAGATCC ACGACCAGAT CGTACGGCGA
GTAAAATCAG GAGTCAGCAC CGGAGTGGAC CGTGAGCAGA TAGAGGGTCG CCTCGCGCTG
GCCAACTCGA ATTTGATCAC GGAGCAGGCG AACCTGCATG ACGTGACGGC ACGTTATCAG
CGTATCGTGG GTCAGCTGCC GGCGGAAGAG CTGTCGGAAT TTACTGTGCC TGTGGAAGCG
ATCCCATCGC ATATTGAAAC AACGCTGCAT GAAGCCTACC GGAAGAATCC TGGATTTCTC
GCTACGCTGA TGGATATCAA GTCGTCGCGG CACGCGGTCG GGGTGCAGAA GTCGAAGTTT
TATCCCCGTT TTGACCTGCG GGCGTATCAT GACTGGAGCT GGGACAAGGA CGGTATTGAC
GGTTATCAGC GTGAAGCGGC AGTCGAGGTG GTGATGAACT ACAATATTCT TAACGGCGGT
TCCGATCTGG CATCGGTGAA ACAATACAAG CAGAAGCTGT ACCGCTCGAT GGATCTTAAG
GAAAAGGCGG ATCACGATTT GCGCCAGACG GTCGAGATCG CCTATAACGA TCGTAAGTCA
CTGACAAGAC AGGTGGAGTA TCTGGACGAG CACCGGAGGC GTCTTGACCA GGTTCGTGTG
GCGTATCTTG ACCAGTTCAC GATAGGCAGA CGAACGCTGC TGGATCTGCT GGACACGGAG
AACGAGTACT ACCAGGCGCA GCGAGCGTAT ATCAACGGGA CATATGATCT GACGATAGCC
GACGCGAGGA CGCTGGCTGG AATGGGCAGG CTGCTCAACG ACATGGGCGT GGTGCGCTAT
GAACTGCCGA CGCTTGAGGA GCTTGACTAC AAAGGGTTTC CGGCAGTGAC AACGGCGGAT
TACAGTGATC CCGTGGAAGC GCCTCAGGGT GCGGAGTAG
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| Protein sequence | MSNNRYSRKT RQLIVACAVV AGMALPKDAD AVADNSVQSV VEHTINGNPE VQAKWHEFMA
ANYEEDVAYG GYFPKLDASA GIGREWNYQE SIPNKDVYTR KGVRLELKQM LFDGLYTHHQ
VCRLKCRGKA LYFEFLQSME SAGLEALRAY ADVQRYRNLV RLAEQNYSYH QEIHDQIVRR
VKSGVSTGVD REQIEGRLAL ANSNLITEQA NLHDVTARYQ RIVGQLPAEE LSEFTVPVEA
IPSHIETTLH EAYRKNPGFL ATLMDIKSSR HAVGVQKSKF YPRFDLRAYH DWSWDKDGID
GYQREAAVEV VMNYNILNGG SDLASVKQYK QKLYRSMDLK EKADHDLRQT VEIAYNDRKS
LTRQVEYLDE HRRRLDQVRV AYLDQFTIGR RTLLDLLDTE NEYYQAQRAY INGTYDLTIA
DARTLAGMGR LLNDMGVVRY ELPTLEELDY KGFPAVTTAD YSDPVEAPQG AE
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