Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1659 |
Symbol | |
ID | 6375345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1789042 |
End bp | 1789485 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642684153 |
Product | hypothetical protein |
Protein accession | YP_001960059 |
Protein GI | 189500589 |
COG category | [R] General function prediction only |
COG ID | [COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.417776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.2077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTACT CAGAAGCAAA GCAGGGAAGA ACGTTTATCA TCAGGCTTGA AGACGGTGAA ATCGTTCATG AGACTCTTGA AAAATTTGCC TTTGACAACA ATATTGCAGC AGCTGCGATC ATTATCCTTG GCGGTGCCGA TAAAGGGAGT AAACTTGTTG TAGGCCCTGA AGAAAGCCGC GCAGACTCGA TCATGCCGAT GCAACATGAA CTCTATGAAG CCCACGAGGT TACGGGCACG GGCACGATCT TTCCTGACGA TACCGGAAAT CCTGTACTGC ACCTTCATAT GGCATGCGGA AGGGAAGAAA ACACCGTAAC AGGATGTGTC CGAAACGGGG TGAAGGTATG GCACGTCATG GAGGTTATCA TGTTCGAAAT GACAGAAACA ACCGCCACCC GCAAGCCTGA TTCTGCAACG GGCTTCAAGC TACTGATACC GTAG
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Protein sequence | MLYSEAKQGR TFIIRLEDGE IVHETLEKFA FDNNIAAAAI IILGGADKGS KLVVGPEESR ADSIMPMQHE LYEAHEVTGT GTIFPDDTGN PVLHLHMACG REENTVTGCV RNGVKVWHVM EVIMFEMTET TATRKPDSAT GFKLLIP
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