Gene Cphamn1_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1659 
Symbol 
ID6375345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1789042 
End bp1789485 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content49% 
IMG OID642684153 
Producthypothetical protein 
Protein accessionYP_001960059 
Protein GI189500589 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.417776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.2077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACT CAGAAGCAAA GCAGGGAAGA ACGTTTATCA TCAGGCTTGA AGACGGTGAA 
ATCGTTCATG AGACTCTTGA AAAATTTGCC TTTGACAACA ATATTGCAGC AGCTGCGATC
ATTATCCTTG GCGGTGCCGA TAAAGGGAGT AAACTTGTTG TAGGCCCTGA AGAAAGCCGC
GCAGACTCGA TCATGCCGAT GCAACATGAA CTCTATGAAG CCCACGAGGT TACGGGCACG
GGCACGATCT TTCCTGACGA TACCGGAAAT CCTGTACTGC ACCTTCATAT GGCATGCGGA
AGGGAAGAAA ACACCGTAAC AGGATGTGTC CGAAACGGGG TGAAGGTATG GCACGTCATG
GAGGTTATCA TGTTCGAAAT GACAGAAACA ACCGCCACCC GCAAGCCTGA TTCTGCAACG
GGCTTCAAGC TACTGATACC GTAG
 
Protein sequence
MLYSEAKQGR TFIIRLEDGE IVHETLEKFA FDNNIAAAAI IILGGADKGS KLVVGPEESR 
ADSIMPMQHE LYEAHEVTGT GTIFPDDTGN PVLHLHMACG REENTVTGCV RNGVKVWHVM
EVIMFEMTET TATRKPDSAT GFKLLIP