Gene Cphamn1_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1652 
Symbol 
ID6375338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1783656 
End bp1784834 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content51% 
IMG OID642684146 
Productsodium/hydrogen exchanger 
Protein accessionYP_001960052 
Protein GI189500582 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.248613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGG CAGAATTTCT TCTTACCCTC GGCGCTATCC TTTTGGCCGG ACTGGCAATT 
GACCTTCTGG GCAAAAAGAC TTTTCTTCCC AGAGTGACGC TTCTCTTGAT TTTCGGCATG
CTTATCGGAC CTTCCGCGAC CAACATTCTC CCACCATTTC TTACTGAAAG ATTTGAGCTG
AGCAGCAACA TGGCGCTGCT GATGATCGGT TTTCTGCTCG GAGGAAAGAT GAGTACATCT
TCCCTCAAAA AAAACGGCAA GTCAATCATC ATCATCTCCG TTGCGGCCGC TATAGCGACA
GCTGTATTCG TGACAGCAGG ACTGGTTGCC GCAGGCTATC CGATGGAAAT CGCCGTGCTG
CTCGGCTGTA TATCGTCCGC CACTGATCCG GCGGCAATCC TCGATGCAGC CATCGTTTCC
GGCAAAAAAA ACAGGTTCAG CGATACATTG CTCGGCGTCG TCGCACTGGA CGATGCCTGG
GGACTTATCC TTTTCAGCTG TGGGATAGCA TATGTGAGCG CATTCCATCT TGACGCCGGA
GGCTCCTCTC CTCTCCTCTA CACTCTGAAA GACATCGGGG GAGCCATCAT TCTGGGCGCA
CTCATCGGCT TGCCGGCGTC ATATCTCACA GGAAGAGTTA AAAAAGGCCA ACCTATGCTA
ACCGAAGCGC TTGGTCTTGT TTTCATCTGC GGAGGCGCTG CCCTTTATCT GGAAGTGTCG
TATCTGATTG CGTCGATGGT CATGGGAGCC GTCATTACAA ACCTTGCCAG ACACCATACC
TATCCCTTCC ATGCTATCGA AGGCATAGAG TGGCCGTTTA TGGTTGTATT TTTCGTTCTG
GCCGGCGCTT CTCTTGAAAT CAGCTCAATA GCACATATCG GAGTTATTGG AGGGGCTTAT
ATTCTTTTCA GAGCCATCGG CAAAATCATG GGAGCGGCGG CAGGCTGTAC AATCAGCAAA
ACCGACCAGG AAACCCGCAA GTGGCTGGGT ATGGCAATGC TTCCACAGGC CGGTGCAGCC
ATGGGAATGG CTCTGGTCGC ATCAGCAGCG TTTCCCGAAT TCAGTCAGAC AATCCTTGCC
GTAATCATCA GCACAACAAT CTTCTTTGAA CTGATCGGAC CAATAGTTAC CCGCCTTGCC
ATGAGCAAAA CAGCAACGTC GCAAAGCTAC AGAGAGTAA
 
Protein sequence
MNPAEFLLTL GAILLAGLAI DLLGKKTFLP RVTLLLIFGM LIGPSATNIL PPFLTERFEL 
SSNMALLMIG FLLGGKMSTS SLKKNGKSII IISVAAAIAT AVFVTAGLVA AGYPMEIAVL
LGCISSATDP AAILDAAIVS GKKNRFSDTL LGVVALDDAW GLILFSCGIA YVSAFHLDAG
GSSPLLYTLK DIGGAIILGA LIGLPASYLT GRVKKGQPML TEALGLVFIC GGAALYLEVS
YLIASMVMGA VITNLARHHT YPFHAIEGIE WPFMVVFFVL AGASLEISSI AHIGVIGGAY
ILFRAIGKIM GAAAGCTISK TDQETRKWLG MAMLPQAGAA MGMALVASAA FPEFSQTILA
VIISTTIFFE LIGPIVTRLA MSKTATSQSY RE