Gene Cphamn1_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1639 
Symbol 
ID6375324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1770501 
End bp1771478 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content46% 
IMG OID642684133 
ProductNucleotidyl transferase 
Protein accessionYP_001960040 
Protein GI189500570 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01208] glucose-1-phosphate thymidylylransferase, long form 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.641353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA TCATACCTGT GGCTGGAGTC GGCACAAGGT TGCGCCCGCA CACATTTTCT 
CAACCCAAGG TACTTCTCAA CGTAGCAGGA AAACCCATTA TCGGGCATAT AATGGACAAA
CTTGTCGAGT CCGGCATAGA TGAGGCCATT GTTATCGTCG GGTATCTTGG AGAGATGATT
GAATCGTACC TCAAGAAGAA CTACGACATA ACGTTCACGT TTGTCAATCA GGAGGAACGC
CTGGGACTTG CTCATGCGAT ATGGATGTGT CATGAATATA TTCATGACAA CGAGCCTGTA
TTTATCCTGC TCGGCGACAC GATTTTTGAC GTCGATCTGA CCGGAGTGCT CAACAGCCCT
GTCTCAACTC TCGGCGTAAG AGAAGTAGAA GATCCCCGCA GATTCGGAAT AGCCATAACC
AGCAACGGCC AGATAGTCAA ACTTGTCGAG AAGCCGAATG AACCGGTAGG AAACCTTGCG
ATCGTTGGTC TGTACTTTAT CCTGCACTCG AAGCCCCTCT TCACCTGTAT CGAAACGCTT
ATCAGAGAGA ACATAAAAAC AAAGGGGGAA TTCCAGCTGA CTGACGCGCT GCAGATGATG
CTCGAAAACG GAGAACCGCT ATCCACATTC CCGGTCAACA ACTGGTATGA TTGCGGAAAA
CCCGAAACAC TTCTTTCCAC AAATGAAACC CTTCTGAAAG AGCACAGTTC TAAATCATCA
ATACGCGGCT GCATCATCAA TGAACCGGCA TTTATCTCCA AAAGCGCGCA AATCAATAAC
GCGATTATCG GTCCGAACAC TTCTATAGGA GAAAACGTCA TTATCGAAGA CGCGATCATT
GAGAATTCGA TTATCGGAAA TTTTTCCAAG GTCCAACATG TCTCTTTGAA CAAATCCATC
ATCGGCAATA ACGTTGACCT CTCAGGTGAT CCTCACGAAG CCAACATAGG AGATTTCTCG
GAAATTAAAC TCCGTTGA
 
Protein sequence
MKAIIPVAGV GTRLRPHTFS QPKVLLNVAG KPIIGHIMDK LVESGIDEAI VIVGYLGEMI 
ESYLKKNYDI TFTFVNQEER LGLAHAIWMC HEYIHDNEPV FILLGDTIFD VDLTGVLNSP
VSTLGVREVE DPRRFGIAIT SNGQIVKLVE KPNEPVGNLA IVGLYFILHS KPLFTCIETL
IRENIKTKGE FQLTDALQMM LENGEPLSTF PVNNWYDCGK PETLLSTNET LLKEHSSKSS
IRGCIINEPA FISKSAQINN AIIGPNTSIG ENVIIEDAII ENSIIGNFSK VQHVSLNKSI
IGNNVDLSGD PHEANIGDFS EIKLR