| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1624 |
|---|
| Symbol | |
|---|
| ID | 6375304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 1751797 |
|---|
| End bp | 1752321 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642684113 |
|---|
| Product | CMP/dCMP deaminase zinc-binding |
|---|
| Protein accession | YP_001960025 |
|---|
| Protein GI | 189500555 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2131] Deoxycytidylate deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.526387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAG ATATTCAACA AGACGACTGT TGTCGGCGTC ACGGTGAAGC GTGTGCTGAT
GGCGGAGAGT CACGGCTCGG TTGGCATGAG TATTTTATGA GTGTGGCCCA TCTGATTTCG
CGGAGGGCTA CCTGCACCAG AGGGCATATC GGCGCGGTAC TCGTCCGTGA CAATAACATT
CTTTCGACCG GTTACAATGG TGCTCCTTCA GGACTTCCTC ACTGCAATGA AACCACCTGC
AGGATCTATA GCAGCAAACA CCCGGACGGA ACGGTCGAGG AGAATTGCGT CAATACCATA
CACGCAGAGA TCAACGCGAT AGCGCAGGCG GCAAAACATG GCGTGTCAAT CAAGGATGCT
GATATATACA TTACCGCCAG TCCTTGCATT CATTGCCTTA AAGTGCTGAT AAATGTCGGC
ATTAAAACTA TCTACTACGA CAAGCCCTAT AAGATAGATC ACATAGCCGA TCTGATCCGG
CTTTCAGGTG TGAAACTGGT ACAGATACAT CCGGAAAATC CGTAA
|
|---|
| Protein sequence | MPEDIQQDDC CRRHGEACAD GGESRLGWHE YFMSVAHLIS RRATCTRGHI GAVLVRDNNI
LSTGYNGAPS GLPHCNETTC RIYSSKHPDG TVEENCVNTI HAEINAIAQA AKHGVSIKDA
DIYITASPCI HCLKVLINVG IKTIYYDKPY KIDHIADLIR LSGVKLVQIH PENP
|
|---|
| |