| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1621 |
|---|
| Symbol | |
|---|
| ID | 6375301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 1748637 |
|---|
| End bp | 1749053 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642684110 |
|---|
| Product | DoxX family protein |
|---|
| Protein accession | YP_001960022 |
|---|
| Protein GI | 189500552 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2259] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000382951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGACC GTATTTTTCA AAATAATGAT CTGGGCAAGC TGTTGCTGCG TCTGCCTGTT
GGCGGCCTGA TGTTGTTTCA CGGGATTCAC AAACTTAAAA ACGGTGTCGG TTTCATTGAG
AAGACTCTCG TGGATGCAGG ATTTCCAGCC TATCTTTCCT GGGGAGTATA TGCAGGTGAG
CTGCTCGCTC CGCTGCTTAT CATTCTGGGT ATTCTTTCCC GTCCCGCAGC GCTGATAGAG
GCATTTGTGA TGATCTCAGC GATTTATCTT GTGCATATGG GAGACCTCCT TTCACTGACG
CAACATGGCG GTTACGGCCT GGAGTTACAG TTTTTATACC TGTTTGGTTC TCTTGCAATC
GTCTTTCTCG GTTCCGGTAG ATACAGCGTT TCGAGGGGCA AAGGTTTGTG GGACTGA
|
|---|
| Protein sequence | MIDRIFQNND LGKLLLRLPV GGLMLFHGIH KLKNGVGFIE KTLVDAGFPA YLSWGVYAGE
LLAPLLIILG ILSRPAALIE AFVMISAIYL VHMGDLLSLT QHGGYGLELQ FLYLFGSLAI
VFLGSGRYSV SRGKGLWD
|
|---|
| |