| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1617 |
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| Symbol | |
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| ID | 6375297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1744239 |
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| End bp | 1745642 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642684106 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001960018 |
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| Protein GI | 189500548 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACC TAAACCATTA TCGGCTGTAT CTGGTTGTCA CGATTGTACT CGCCTTGTTA
CCCACGTTCA GTTTAGCTGC CGGTGAAAAT GTGGTCAAAG GGCAGTCTGT GACACTGTCG
CTCGATGAGG CGGTTTCCAT CGGTCTTGAA CGAAATCGCG ACCTTGAAGT CGCGCGGCTG
GATCGTGCTA TTGCCCGTCA GAAAGTTCGG GAGGCATGGG CGGGGGTACT TCCTCAGCTC
GATGCAGGAT TCGACTATAC GAGAACCCTT GAACCTTCGG TTATTTACTT TCCCGACATA
TTTGGCGGTG ATCCCACCAG GTTTACTCCT CTGGAAATCA GTCAGGATAA TGCAATGGTT
GCCTCGCTTT CCCTGAGTCA GCCGCTCTTC AACCTGAAGG CGCTTGCGGG CATCAAAGCA
TCCTCAACAG TCAGGAAAAT CAGCATGGAA GCCTATCGTC AGACTGAGGC GGATGTGATC
AGCGATATAA AGATCGCATA CTACAATGTT CTGATTTCTG ACAGGCAGGT TACAATACTC
GAACAGAGCA TTTCCCGCTG GGAGACCGCT CTTCGTGACA GTCGTTCTCT TTTCAGGGAA
GGGGTGGCTG CGGATATCGA TACCCTGAAA GCATATCTCT CCGTAGAAAA TATAAAGCCC
GATCTCATAC AGGCGCGCAA TAACGCGGTG ATATCGAGGA CGCAGCTCAA GAACAGTATC
GGTATCGATC CTGAAAGCAC CATGGTGCTC TCTGATTCTC TTGTGTACAG CAAAGGAGCA
TATCCCGATG ATATCTCTGC AGCCTATGCC GAAGCCTTGT CTGCAAGGCC TGAGGTTCGT
CAGCTCGAGC TGCAGATCGA AGCGGAAGCG CAGAATGTCA ATGCTGCACA GGCTGAACGT
TATCCCGCGA TCAATGCAGT AGGGCAGTTG CAGGCACAAA CCCAGTTTAA TGACGATGTG
GCGCTCAAAG ATACGGACTG GCCGGTTACT TCATCCGTTG GCTTACAGGT TTCCCTGCCG
ATTTTTACCG GGTTCCGGAT AAGCTCGCAG GTAGAGCAGG CAAAGCTCGG CCGATTAAAG
ACTATGACAA GGCTTGAGGA TTTGAAAGCA GATATACGGG CTGAGGTTGA AGTGAAGCTT
TCCAGCCTTC AGGAGTCACA ACAACGGATA GAAGTTCAGT CCAGAACCAT ACGTACCGCT
GAGCGGAGCT ATGAGATCAC GCTTCTTCGT TTCAGGGAAG GGATCGGTTC GCAGCTTGAA
CTTGCCGACG CTGAATTACA GCTGAACAAG TCCAAAACCA ATTACCTTCA GGCTATCTAC
GACTATCTCG TCGCCCGCAT CCAATACGAC AAGGCTCTCG GCAGAAGCGC GAGGCCGGGG
GGAGAACAGC AAGACGGCTC CTGA
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| Protein sequence | MTDLNHYRLY LVVTIVLALL PTFSLAAGEN VVKGQSVTLS LDEAVSIGLE RNRDLEVARL
DRAIARQKVR EAWAGVLPQL DAGFDYTRTL EPSVIYFPDI FGGDPTRFTP LEISQDNAMV
ASLSLSQPLF NLKALAGIKA SSTVRKISME AYRQTEADVI SDIKIAYYNV LISDRQVTIL
EQSISRWETA LRDSRSLFRE GVAADIDTLK AYLSVENIKP DLIQARNNAV ISRTQLKNSI
GIDPESTMVL SDSLVYSKGA YPDDISAAYA EALSARPEVR QLELQIEAEA QNVNAAQAER
YPAINAVGQL QAQTQFNDDV ALKDTDWPVT SSVGLQVSLP IFTGFRISSQ VEQAKLGRLK
TMTRLEDLKA DIRAEVEVKL SSLQESQQRI EVQSRTIRTA ERSYEITLLR FREGIGSQLE
LADAELQLNK SKTNYLQAIY DYLVARIQYD KALGRSARPG GEQQDGS
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