Gene Cphamn1_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1612 
Symbol 
ID6375292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1736685 
End bp1737206 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content49% 
IMG OID642684101 
Producthistidine triad (HIT) protein 
Protein accessionYP_001960013 
Protein GI189500543 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAA TGTATTCGCC GTGGAGAGAG GTGTACATGG AGTCCTTCAA GGACGAAAAA 
CACCCGTTCC ATCCGGGAAA AGACATCTTT ACCGACATAC CTCCTGAAGA AGATGAAGAG
CGTTATGTGC TGCACCGCGC GAAAAAGAGT TTCATCATCA TGAACCTTTT TCCCTACAAC
TGCGGACATC TTATGGTTAT TCCCTTCAAG CAGACCCCTG AGCTTTCCGA GCTCGACGAC
ACGACAAAGC TTGAAATCAT GCAGCTTACC GATGTCTGCA TGGAAGCCCT CACAAGAACG
ATCAGTCCTC ACGGTTTCAA TTTCGGAGTC AACGTCGGGA AAGTCGCCGG AGGAAGTGTC
GACTCGCATA TCCACTTTCA CATCGTACCC CGCTGGGACG GCGACACGAA CTTCATGCCG
GTCATCGGAG AAACAAAGGT GTTAAGCAAC GACATGCGAA AACTCTACAA AAAGCTGCAT
AAAGCAATCG CGGAAATCGT AGAGGAAAAA GCCGGGCAAT GA
 
Protein sequence
MRKMYSPWRE VYMESFKDEK HPFHPGKDIF TDIPPEEDEE RYVLHRAKKS FIIMNLFPYN 
CGHLMVIPFK QTPELSELDD TTKLEIMQLT DVCMEALTRT ISPHGFNFGV NVGKVAGGSV
DSHIHFHIVP RWDGDTNFMP VIGETKVLSN DMRKLYKKLH KAIAEIVEEK AGQ