Gene Cphamn1_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1605 
Symbol 
ID6375283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1732071 
End bp1732598 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content49% 
IMG OID642684093 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_001960007 
Protein GI189500537 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAAT CACAGGAAAG CGTATCGAGG TCACAAGAGG TTGAAGCTGC TCTTGCTCTT 
TGGGAGATAG TCCATGCGGC ATTTCCTGAT GCGGTATCGG CTTTGGATGA AAATCCGTTC
ATGCCCTTTT TCGAGGTGCA GCAGACTGAA CGCTGGAGGG AAATCGCTCT GTTTTTACGG
GACGACCCGA AACTGCGATG TAACTACATG GCCTGTCTGT CAGGAGTTGA TTACCCTGAA
GAGGGTAAGC TCGGGATCGT TTGTAACCTT GAATCAGTAG GGGTGCATGC TCATAAAATA
GCCGTTAAGG TTTACTGTGA CAGGGAGGAT GGTGTGATTC CTTCCGTGGC GAGGGTATGG
AAAACAGCAG ACTGGCATGA GAGGGAGGCG TTTGATATGT ATGGAATGAC TTTCAGCGGC
CATCCTGATC TGAGGCGAAT TCTCTGTCCT GAAGACTGGA CAGGTTATCC TCTGCGCAAG
GATTACGTGG TGCAGGAGTC TTATCATGGA ATCAAGGTTC CGAATTGA
 
Protein sequence
MGESQESVSR SQEVEAALAL WEIVHAAFPD AVSALDENPF MPFFEVQQTE RWREIALFLR 
DDPKLRCNYM ACLSGVDYPE EGKLGIVCNL ESVGVHAHKI AVKVYCDRED GVIPSVARVW
KTADWHEREA FDMYGMTFSG HPDLRRILCP EDWTGYPLRK DYVVQESYHG IKVPN