Gene Cphamn1_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1583 
Symbol 
ID6375261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1708969 
End bp1709427 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content45% 
IMG OID642684071 
Productcytochrome c class I 
Protein accessionYP_001959985 
Protein GI189500515 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.889837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAC ATGATAATCC GTCTGAAAGC AATAACAATA TTCCTAAAGG AATGATTGCC 
TTTTTTGCTT TTGTCATTGT GTTTCTTTTC AGCTATATCG CTCTCTATAC GCCTGCTATT
TCCGGATGGT CTTTTTATAC GATTTTTGAA GAGAAAATGG CTGAGGCAGA GGCTCAAGCT
TCTGTTGACG GCACCGAACT AAAAGATTCA TACAGCGGCG ACGAGGCAGC CATTGCCGAG
GGCGCGAAAA TTTACGCGTC GAGTTGCGCT GTCTGCCACA AGGCGGATGG AACCGGAGGT
ATCGGGAGCG ATCTTACCGC TGCATCAAAA TACGGATCAA CGCAGGAAGA TCTTTATGAG
TCAATTGCGA ATGGAAGAGA AGGGGGAATG CCGCCATTCA AACAGCAGTT GAGCCGGATG
AAAATTCGTA AAGTGATCGC TTTTCTGGAA ACACTTTGA
 
Protein sequence
MNEHDNPSES NNNIPKGMIA FFAFVIVFLF SYIALYTPAI SGWSFYTIFE EKMAEAEAQA 
SVDGTELKDS YSGDEAAIAE GAKIYASSCA VCHKADGTGG IGSDLTAASK YGSTQEDLYE
SIANGREGGM PPFKQQLSRM KIRKVIAFLE TL