| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1569 |
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| Symbol | |
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| ID | 6375247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1695745 |
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| End bp | 1696908 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642684059 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001959973 |
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| Protein GI | 189500503 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.5058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGA TTTTAACGTT AAACAACATC TCTGTCACCG GTCTGGACCG GTTGCCCCGT
GACAACTACG AAATCGCTTC AGAGATAGGA CACCCTGACG CCATTCTCCT CCGTTCATTC
AAAATGCACG ATATGGAGAT CCCGGATACC CTGAAAGCTG TTGGCCGGGC AGGAGCAGGG
GTCAACAACA TCCCTGTCGA AAAGATGACC GCGATGGGAA TACCGGTATT CAACACCCCC
GGCGCGAACG CAAATGCCGT AAAGGAACTG GTCATAGCTG CCATGCTGAT GGCAAGCCGT
AATCTTACCC AGGCATGGGA ATACGCCCGC AACCTTGAGG GAGATGACGC TGCCATCGCA
AAAGCTGTTG AGGCTGGAAA GAAAAAATAC GTCGGAACAG AACTGCCGGG AAAAACACTC
GGGGTCATAG GACTCGGGGC AATCGGCGGG CAGATTGCCA ATGCGGTTAT TGCACTTGGA
ATGAACGTCA TCGGCTACGA CCCTACCGTT ACGATTCAAC ACGCATGGAA GCTCTCTGCC
GAAGTCGAAC GGGCACTCAG TTTTGAAGAA CTCCTTTCTG AAGCTGACTA CATCACTTTC
CATGTCCCCC TCATCGACGC AACCAGAAAC ATGCTGAATG CCGAAAGCAT TAAGCATATG
AAAAAAAACG CCATTGTGCT CAACTTTGCG CGCGGCGGTA TTGTCGATGA TGCCGCGATT
ATCAAGGCTC TCGATGAAGA GAACCTGTAC GCTTACATTA ATGACTTCCC GACAAACGAG
AACAAAAACC ACCCTAGTGT TGTTTCCCTT CCTCATCTCG GAGCATCAAC ACTTGAGGCT
GAAGACAATT GCGCCGTCAT GGTTGCCGAC CAGGTTCGGG ACTACCTTGA AAACGGCAAC
ATCACCAACT CGGTCAATTT CCCTGAAATG AGGATGCCCC GGGCCGGCGC GTCAAGAATT
GCTATCTCCA ACTCGAATGT CCCCAAAATG GTTGGCCAGA TCACCTCGGT ACTTGCAGAC
TCCGGCATCA ATATTGTCGA TATGCTTAAC AAATCACGCG GGGATATCGC CTATAACCTG
CTCGATCTCG GGACCGAAGT GGGCAAAGAT ATTGCGGATA AAATCAAAAA AATCGAAGGT
GTTCTGGCTG TACGCATCAT GTAA
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| Protein sequence | MFKILTLNNI SVTGLDRLPR DNYEIASEIG HPDAILLRSF KMHDMEIPDT LKAVGRAGAG
VNNIPVEKMT AMGIPVFNTP GANANAVKEL VIAAMLMASR NLTQAWEYAR NLEGDDAAIA
KAVEAGKKKY VGTELPGKTL GVIGLGAIGG QIANAVIALG MNVIGYDPTV TIQHAWKLSA
EVERALSFEE LLSEADYITF HVPLIDATRN MLNAESIKHM KKNAIVLNFA RGGIVDDAAI
IKALDEENLY AYINDFPTNE NKNHPSVVSL PHLGASTLEA EDNCAVMVAD QVRDYLENGN
ITNSVNFPEM RMPRAGASRI AISNSNVPKM VGQITSVLAD SGINIVDMLN KSRGDIAYNL
LDLGTEVGKD IADKIKKIEG VLAVRIM
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