Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1563 |
Symbol | |
ID | 6375241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1691313 |
End bp | 1692023 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642684053 |
Product | major paralogous domain |
Protein accession | YP_001959967 |
Protein GI | 189500497 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02145] Fibrobacter succinogenes major paralogous domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.398386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCTCA TCTTTTTTGT TATCGCAGCA TCCGGATGTT CCAAAGAACA GGCTGTCATG CAGAAAGCGG CTCAGCCGGT AACCGATATT GATGGAAAAA CATATAAGAC TGTGCAGATC GGGGACCAGA TATGGATGGC TGAAAATCTT GCCGTAACGA GATATCGTAA CGGTGACCCC GTTCCGGGTG TGGCTGAAGA GGGCAAATGG GTTGTCCTTG AAACCGGGGC CTGGTCTGAA TATGACAATG ACGCGGAAAA GGGCAAGGTA TACGGAAAGC TATACAACTG GTATGCTGTC GCTGATCCGC GTGGTCTTGC ACCGGAAGGG TGGCGGATTC CGACAGAAGA GGACTGGCGA GAGCTTGAAG CGCATCTCGG GATGAAACCG GAGGATGTCG GAGAAATAGA GTTTCGGGGT AATGAACAGA ATGTCGGCAG CAAGCTCAAG GAAACCGGAA CTGAACACTG GAAGGCGCCA AACACCGGGG CAACAAACGA AACCGGGTTT ACAGCTCTTG CCGGGGGGTA TCGGGATAAC GACGGCCCGT TTAACTTCTT CGGCAGGTAC GGTGCGTTCT GGACCGTTAC CGAGGCTGAA AACGGACGAG TCTGGTTCCG GGGTATGACT ACCACCGAAA AGGGCGTGTA CCGTTTCAGT TTCAACAAAA AGTGCGGTTT TTCCGTCCGT TGCGTGAAAG ATCAGCCGTA A
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Protein sequence | MFLIFFVIAA SGCSKEQAVM QKAAQPVTDI DGKTYKTVQI GDQIWMAENL AVTRYRNGDP VPGVAEEGKW VVLETGAWSE YDNDAEKGKV YGKLYNWYAV ADPRGLAPEG WRIPTEEDWR ELEAHLGMKP EDVGEIEFRG NEQNVGSKLK ETGTEHWKAP NTGATNETGF TALAGGYRDN DGPFNFFGRY GAFWTVTEAE NGRVWFRGMT TTEKGVYRFS FNKKCGFSVR CVKDQP
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