| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1559 |
|---|
| Symbol | |
|---|
| ID | 6375237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 1682551 |
|---|
| End bp | 1683780 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642684049 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001959963 |
|---|
| Protein GI | 189500493 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.158764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.219283 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAC GAATACTGAT GTTGTTTTTG ATAACCGCGA TATTCAGCGG CTCTTCACTG
CAGGCAGGGG TCACAAAAGA CTATGGAGAA AAGGGGGGCA GGGATCAGGC GGAAACAGAT
ATCCGAAAAG CTATGGATGC GTATGCGAGG CAATACGCAA ATCTCAGGCC GATTGAAGAA
AGATTTCCTG ACGATTATCA GCTGGTACAG CTCTGTTTGC TGCTCGATAC AAGCAACAGT
ATGGATGGGT TGATCCTTCA GGCCAAGAGC CAGCTATGGA AAATAGTGAA TGAACTGTCC
GGGGTGCATA AAGACGGCAA GGATATTCGT CTTGAGGTTG CGTTGTATGA ATACGGAAAT
GATAACCTTT CACTCTCTTC AGGATATATC AGACAGGTTA CCCCCTTTAC GGAAAATCTT
GACCTGCTGT CCGAGGCGCT GTTTTCACTT GAAACAAATG GAGGCTCCGA ATATTGCGGA
CATGTTATCG GGAGCAGCCT CAACAGGTTA CAATGGAACA GGTCTGATGA GGGGCTGAAA
ATGATTTTTA TCGCCGGCAA TGAACCGTTT GACCAGGGTT CGGTGAATTT CAGGGTGAGT
TGCGGCTGGG CGGCTGAGAG AGATATTTTT GTCAATACCA TTTATTGCGG TGACTACCAG
ACAGGCGTCA ATACGTTGTG GAAGACGGGG GCAACCATTG GAAAAGGAAA CTATTTCGCG
ATAGACAGTG ACAGATTGAC AAGAGTCATT GAAACCCCCT ATGATGATGA TCTTATTATG
CTCAACAGCA GGATGAACAG AACCTATGTG CCGTATGGAA AGCGTGGAAA GGAGAGTTTG
GCACGTCAAT CTGAACAGGA CGCAAACGCT TCAGGGCTTT CACAATCGAT TTATGCGGGA
AGAGCTGCTA CAAAAGGATC GAAACTCTAT AAAGCATCAG ACTGGGATTT GGTTGACGCT
CTTGAAGATA CACTGGTAAC GGTGGATGAG CTTGAAAAAG AATACCTGCC GGAAGAGCTG
AAAAAGATGA CCACACAGGA GCTGAGCAGT TATGTTCAGA AGAAAAAGAA AGAACGGAAA
GCGGTGAAAC AGCAGATTAA CGATATAAGT CGAAAACGGG ACCACTATAT CCGGAACAAA
GAGATGGAGG GCGATGAAGC AAGCCTTGGT TCCTCGATTG TCAAGAGCCT GCGAGATCAG
GCTGAAACAA AGAATTTCAG TTTTAAATAG
|
|---|
| Protein sequence | MNRRILMLFL ITAIFSGSSL QAGVTKDYGE KGGRDQAETD IRKAMDAYAR QYANLRPIEE
RFPDDYQLVQ LCLLLDTSNS MDGLILQAKS QLWKIVNELS GVHKDGKDIR LEVALYEYGN
DNLSLSSGYI RQVTPFTENL DLLSEALFSL ETNGGSEYCG HVIGSSLNRL QWNRSDEGLK
MIFIAGNEPF DQGSVNFRVS CGWAAERDIF VNTIYCGDYQ TGVNTLWKTG ATIGKGNYFA
IDSDRLTRVI ETPYDDDLIM LNSRMNRTYV PYGKRGKESL ARQSEQDANA SGLSQSIYAG
RAATKGSKLY KASDWDLVDA LEDTLVTVDE LEKEYLPEEL KKMTTQELSS YVQKKKKERK
AVKQQINDIS RKRDHYIRNK EMEGDEASLG SSIVKSLRDQ AETKNFSFK
|
|---|
| |