Gene Cphamn1_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1554 
Symbol 
ID6375232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1678002 
End bp1679228 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content47% 
IMG OID642684044 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001959958 
Protein GI189500488 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.138705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAA AGATAGTTGT CCTGGGCGCC GGTACCGGCG GAACGATCAT ATCCAACAAT 
CTCCGAAGAC ATCTTCCTGA AGAGTGGGAA ATCACGGTGA TCGATCGTGA TGACAAGCAT
ATCTATCAGC CGGGCATGCT CTTTGTACCG TTTGACATAC AAAAATCCAG CACACTGACC
CGGTCGAGGA AGAAATACAT TCTTCCCGGC ATTAATTTTG TCATCGATGA AATCACTCGA
ATTGATCCGG AAAAGAGAGA AGTTACAACC AAAAACCACA GCTTTTCCTA TGACTTTCTG
GTGATCAGCA CCGGCTGCAA AATTGTTCCT GAGGAGAATG ACGGATTGAT GGATGCGTGG
GGAAAAAATG CATTTACTTT CTACTCGATA GAGGGGGCTG ATCAGCTGCG GCAAAAGCTC
AAGGAGTTCG ACGGCGGCAA ACTGGTACTT AATATTGCAG AACTGCCCTT CAAGTGCCCT
GTTGCACCTA TCGAGTTTGT CTTTTTGGCT GACTGGTATT TCAAGAAAAG AGGCATCAGA
AACAAGGTAG AGATCGAGCT GGTTACTCCC CTCACCGGAG CGTTTACAAA ACCCAAGGCC
TCGGCTGTTT TTGGAGAATC CGCTCGGGAA AAGAACATTA CAATAACGCC GAAGTTCGAG
CTGAATGAAG TGAACGGCAA AGAAAAATAC ATAGAATCAA TACAAGGTGA CAAGATCCCC
TATGACATGC TGGTTATCAT ACCAACGACT ATCGGCGACG AAGTCATCAG CGAATCAGGA
ATGGATGACG GCATAGGTTA CGTCCCGACG AACATCAACA CCCTGCAAGC CCTGAAGCAT
GAAAGAGTCT ATGTTATCGG CGATGCGACC AATGTGCCGA CATCAAAGGC CGGATCTGTC
GCTCATTATG AAGCCGATGT GGTTGTTTTT AATATTATGT CCGAGATCCA CGGCACCAAA
CCGGAAGAAA TATTTGACGG TCATTCGACC TGCTTCATCG TCTACTCAAA AGGAACCTCT
TCACTGATAG ACTTCAACTA CAAAATTGAA CCGCTGCCCG GCAAGTTCCC GTTGCCACAT
ATGGGCCCGT TCTCCCTTCT CAAGGAAACA AAGGCCAACT GGTACGGAAA ACTTGGATTT
GAGTGGCTGT ACTGGAATGT CCTGCTCGCA GGAAAACATC TTGGCATGCC TCCAACCCTG
GTCATGGCCG GAAAAGAAGT CGGATAA
 
Protein sequence
MSKKIVVLGA GTGGTIISNN LRRHLPEEWE ITVIDRDDKH IYQPGMLFVP FDIQKSSTLT 
RSRKKYILPG INFVIDEITR IDPEKREVTT KNHSFSYDFL VISTGCKIVP EENDGLMDAW
GKNAFTFYSI EGADQLRQKL KEFDGGKLVL NIAELPFKCP VAPIEFVFLA DWYFKKRGIR
NKVEIELVTP LTGAFTKPKA SAVFGESARE KNITITPKFE LNEVNGKEKY IESIQGDKIP
YDMLVIIPTT IGDEVISESG MDDGIGYVPT NINTLQALKH ERVYVIGDAT NVPTSKAGSV
AHYEADVVVF NIMSEIHGTK PEEIFDGHST CFIVYSKGTS SLIDFNYKIE PLPGKFPLPH
MGPFSLLKET KANWYGKLGF EWLYWNVLLA GKHLGMPPTL VMAGKEVG