Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1548 |
Symbol | |
ID | 6375226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1671492 |
End bp | 1672211 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642684039 |
Product | hypothetical protein |
Protein accession | YP_001959953 |
Protein GI | 189500483 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000235298 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0701813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATA TTCCGAAAAT CCTTAAATCG ACGCAGCCGT TACTTTATGA GACGGGGTTT GACGAGTGGC CTTATGGGTA TGCCGGTTCA TGCTTCTCCG TACGTTGGAA AAAGACTCTG TACATTGTTT CAGCATATCA TTGCTACGAG AATCACCAGA TTGCTCCTGA AAGTACGCTT TACTCAATTC CATCCGATCA AAGAAGCTTC TTCGGCTTCT GCAACACATT GCGTGGGAAA GTTCAGGGGG TTAGCGATCA AAAGCACTAT GACCAGATCG CACTAGAGGT ATCTTGTGAG ATACATGATC GAACCAGTCT TGATTCCGTT GTCGCGCTTG ACCTTAGCAT ACCCAGCAAT TCTATCTCGC TCTCTGAAGC TGGCCTGAGC GATATTTGGT TGAGGGGTTT CGTTTTCGAC AATCCAGCTC ACGAGGTTTG CTACGAACAA TGCAAGATTC GACAGCAAGC CTACGTAACA AACGGAATAG TTTCTTCGAG GAAAAGTACT TTTGATCATT GTCATATGAT TAAAGTCAAA ACACCGATTC CTGAGGGTTT TTCACCAAGG GGTATGAGCG GTAGCGCGGT CTATGGTAAG GATCTGAGTG GCAATGTACG GTTCGGTGGC ACTGTAATTG AGTACAATGA ATACACAAAC GAATATCTGG TTATAGATGC AGCAGTTTTG TCTGGGGTGC TTGACCATGC AAATACCTAA
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Protein sequence | MSDIPKILKS TQPLLYETGF DEWPYGYAGS CFSVRWKKTL YIVSAYHCYE NHQIAPESTL YSIPSDQRSF FGFCNTLRGK VQGVSDQKHY DQIALEVSCE IHDRTSLDSV VALDLSIPSN SISLSEAGLS DIWLRGFVFD NPAHEVCYEQ CKIRQQAYVT NGIVSSRKST FDHCHMIKVK TPIPEGFSPR GMSGSAVYGK DLSGNVRFGG TVIEYNEYTN EYLVIDAAVL SGVLDHANT
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