Gene Cphamn1_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1548 
Symbol 
ID6375226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1671492 
End bp1672211 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content45% 
IMG OID642684039 
Producthypothetical protein 
Protein accessionYP_001959953 
Protein GI189500483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000235298 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0701813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA TTCCGAAAAT CCTTAAATCG ACGCAGCCGT TACTTTATGA GACGGGGTTT 
GACGAGTGGC CTTATGGGTA TGCCGGTTCA TGCTTCTCCG TACGTTGGAA AAAGACTCTG
TACATTGTTT CAGCATATCA TTGCTACGAG AATCACCAGA TTGCTCCTGA AAGTACGCTT
TACTCAATTC CATCCGATCA AAGAAGCTTC TTCGGCTTCT GCAACACATT GCGTGGGAAA
GTTCAGGGGG TTAGCGATCA AAAGCACTAT GACCAGATCG CACTAGAGGT ATCTTGTGAG
ATACATGATC GAACCAGTCT TGATTCCGTT GTCGCGCTTG ACCTTAGCAT ACCCAGCAAT
TCTATCTCGC TCTCTGAAGC TGGCCTGAGC GATATTTGGT TGAGGGGTTT CGTTTTCGAC
AATCCAGCTC ACGAGGTTTG CTACGAACAA TGCAAGATTC GACAGCAAGC CTACGTAACA
AACGGAATAG TTTCTTCGAG GAAAAGTACT TTTGATCATT GTCATATGAT TAAAGTCAAA
ACACCGATTC CTGAGGGTTT TTCACCAAGG GGTATGAGCG GTAGCGCGGT CTATGGTAAG
GATCTGAGTG GCAATGTACG GTTCGGTGGC ACTGTAATTG AGTACAATGA ATACACAAAC
GAATATCTGG TTATAGATGC AGCAGTTTTG TCTGGGGTGC TTGACCATGC AAATACCTAA
 
Protein sequence
MSDIPKILKS TQPLLYETGF DEWPYGYAGS CFSVRWKKTL YIVSAYHCYE NHQIAPESTL 
YSIPSDQRSF FGFCNTLRGK VQGVSDQKHY DQIALEVSCE IHDRTSLDSV VALDLSIPSN
SISLSEAGLS DIWLRGFVFD NPAHEVCYEQ CKIRQQAYVT NGIVSSRKST FDHCHMIKVK
TPIPEGFSPR GMSGSAVYGK DLSGNVRFGG TVIEYNEYTN EYLVIDAAVL SGVLDHANT