Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1547 |
Symbol | |
ID | 6375225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1670631 |
End bp | 1671401 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642684038 |
Product | response regulator receiver protein |
Protein accession | YP_001959952 |
Protein GI | 189500482 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00304895 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.145074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCCAG AAAAATTCGC AGATACAGCG AAAGGGTTTA CCAAAAGCCC GCTCGGTATT ATTGCGCTAT TTATCGTTCT TGTGTACGGG TTTGCCTCTC TTGTCGTAGG TTTCGGAAAC GGCCTTGCCG AGCATGTCGC ACCGCTAATT TATTTTATGG TGTTCTTTCC AGTGGTTGTG TTCGCTGGCT TCCTCTGGCT TGTAGCAAAA CATCACAACA AGCTCTATGG GCCATCCGAT TTTAAAGACG AGGATAATTT CCTAAAAGCA CAAATGGCCA CAGCTGCATC TCTCGCTGCA GCGACTGCAA AACAACCAGA AAACAGCTCG GGGGTCACTG AGACACAACT CCGAGAGATT GTAAATGTTG TATCTAGTGC TAAGCGGCAG AATAAACATG AAAAATGGCG TAATCGCATT TTGTGGGTAG ATGATCGCCC CGAAAATAAT GTCTACGAAC GACAAGCTTT TGAAGCTCAA GGCATGGAAT TTTCACTTGC GCTTTCTACA GATGAAGCTT TAGAGCTTCT CAAAAAAAAT AAATTCGCAG CCATCATTTC TGATATGGGG CGAAAAGAAG GTCCGCAAGA AGGCTACGTT CTGCTTGAGA AGCTCAGGGC CATGGAAAAT CAAACACCTT TCATGATCTA CGCAGCATCA AATTTGCCTG AACACAAAAA AATGGCAAGA GAGCGAGGGG CTATAGGCTC CACAAACAGA GCGGATGAGC TTTTTCATAC TGTGATGAGC GCAATCACAA ATGGCTCATA A
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Protein sequence | MEPEKFADTA KGFTKSPLGI IALFIVLVYG FASLVVGFGN GLAEHVAPLI YFMVFFPVVV FAGFLWLVAK HHNKLYGPSD FKDEDNFLKA QMATAASLAA ATAKQPENSS GVTETQLREI VNVVSSAKRQ NKHEKWRNRI LWVDDRPENN VYERQAFEAQ GMEFSLALST DEALELLKKN KFAAIISDMG RKEGPQEGYV LLEKLRAMEN QTPFMIYAAS NLPEHKKMAR ERGAIGSTNR ADELFHTVMS AITNGS
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