| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1545 |
|---|
| Symbol | |
|---|
| ID | 6375223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1669402 |
|---|
| End bp | 1670142 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642684036 |
|---|
| Product | IstB domain protein ATP-binding protein |
|---|
| Protein accession | YP_001959950 |
|---|
| Protein GI | 189500480 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1484] DNA replication protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.138616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0723168 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAC AACTTACTTT AGACCAGCTT CGCCGCATGA GGCTTCACGG AATGGCAGAG
GCCTATGATG CCCTGCTTAC TCTGCCGGTG CAGGAGCAAC CGACAGCTGA CCTCATGATC
GGCCAGTTGG TCGAGGCCGA ACGCATCTAC CGGAAGGAGC AAACGACTCG CCGGTACCTG
CAACAAAGCA AGATCCGCTA TCCGGCATTG CTGGAACAGA TCCATTGCAA CACAGCGCGG
AACCTGAGCC AGCAGCAGTT GCTCAGTCTG GCCGACGGCC GCTTTATCGA GCGCGGAGAA
AACGTCCTGA TCACCGGCGC CACGGGATGT GGGAAAAGCT ACCTCGCCTC AGCACTGGGT
CGACAGGCCT GCTCGCTTGG CTACAGCACC CTTTACCTGA GCATGAACCG CATGATGGAA
CAACTGACTC AGGTCAAGCT CGACGGGACG TACCTGAAAT GGCTCAACAA ACTCGAAAAA
ACGCGGCTTT TGATCATTGA TGATTTTGGC TTGCAACCGC TCGATCAGCC AACACGGCTG
GCTTTACTCC AGATCCTTGA AGATCGATAT GGAAAGCAGG CAGCAATCTT CACCGCGCAG
TTGCCGGTTG CTGAATGGCA TGATGTTATT GCTGAGCCGA CCATTGCCGA CAGTATCCTT
GACCGGCTCT TAAGCAATGC ACACAGAATC GAACTGAAAG GGCCTTCTCT GCGGCGGCAA
AAACAGGAAA AAAATATGTA A
|
|---|
| Protein sequence | MNTQLTLDQL RRMRLHGMAE AYDALLTLPV QEQPTADLMI GQLVEAERIY RKEQTTRRYL
QQSKIRYPAL LEQIHCNTAR NLSQQQLLSL ADGRFIERGE NVLITGATGC GKSYLASALG
RQACSLGYST LYLSMNRMME QLTQVKLDGT YLKWLNKLEK TRLLIIDDFG LQPLDQPTRL
ALLQILEDRY GKQAAIFTAQ LPVAEWHDVI AEPTIADSIL DRLLSNAHRI ELKGPSLRRQ
KQEKNM
|
|---|
| |