Gene Cphamn1_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1542 
Symbol 
ID6375220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1666413 
End bp1666967 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content41% 
IMG OID642684034 
Productrestriction endonuclease 
Protein accessionYP_001959948 
Protein GI189500478 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.145074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGTG CTTGCGGTCA ATTAAAGGCT CTAGATCTTA CAGACATAAA CGCGCCACTC 
GAAGAAGTCA ATCGATATCT CGTAGCCAAA TATCAAGACC GTTTTGAAGT CAATCCAAGG
AAGTTTGAAG AGGTAGTAGC CTCGGTTTTT CACTCATTAG GATACCGATC GGAGATTACA
GCATACCAAA AGGATGGTGG TATAGATGTT GTTTTAAAAG AATCAGATAG CACTATTGGA
ATTCAGGTTA AGAGGTACAA GAACAAAATT GAGGCAGAGC AAATTAGGTC TTTAGCAGGG
GCTCTTATTT TAAACGGCCA TACATCTGGT ATTTTTGTTA CTACATCTTC TTTCCGCGCG
GGCGCAATCA AGGCAGGAAG AGATTACGTC TCAAGAGGCA TTCCAATCGA ACTATTCGAT
GCTAAACGAT TTTATGACGC CCTAAAGATC GCAGAGACTA CAGAGATCAC CGAAGATAAC
GCAGAGGACA TTTATTACGA AGTTATTGGT GCGGGTGATA GTCAGGTGAT TTATGAAAAT
GAAGGCCCAT ATTGA
 
Protein sequence
MDGACGQLKA LDLTDINAPL EEVNRYLVAK YQDRFEVNPR KFEEVVASVF HSLGYRSEIT 
AYQKDGGIDV VLKESDSTIG IQVKRYKNKI EAEQIRSLAG ALILNGHTSG IFVTTSSFRA
GAIKAGRDYV SRGIPIELFD AKRFYDALKI AETTEITEDN AEDIYYEVIG AGDSQVIYEN
EGPY