| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1535 |
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| Symbol | |
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| ID | 6375213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1657426 |
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| End bp | 1660344 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642684028 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001959942 |
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| Protein GI | 189500472 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.39302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.5632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATTTC ACACTTCCTT AACCGATCCT TTGCACAATC GTCACAGGAG ACTGTTTGCC
GGAAAATCCA AAAGAGATAT TCTGTTTGCG ACATGGATTT CCCTCTCTTT TCATCGTGGC
TTTCCAACAT TAACGGAAAA TACAATGAGA CATTTGTTTT CGTATTTATT CATCTGTCTG
ACTACGCTTG CATGCCATGG ATTTGCAGCA CCCGGCATTG CTCAAGCTGA AACAACAGGC
TCCTCTTCCG GCACCACGAT AACCGGTCGT GTAGTCGATG AGGTAGACGG TCTTCCGCTC
CCCGGTGCTA ACATCTCCGT CAAAGGCACG TCAAAAGGTT CTATTACCGG GCAGGACGGA
CGTTACCGGC TTGAAAACGT TTCCGGTGCT ACTGCAGTCA TCGAAGCATC CTATATCGGA
TATGTAAAAA GTGATATTCC AATAACCCTT TCACCCGGCA AAGCCGTTAT AAAAAATATA
CGGCTTAAAC CCGGCGTCTT GATCAGCGAG GAAATCACCG TTGTTGGCGA ACTCCTGAAG
GGCCAGGCAA AAGCACTGAA TCAGCAGAAA AACGACGTCA ATGTCACCAA TGTTGTTGCT
TCAGACCAGA TCGGTAAATT TCCCGACTCC AACATCGGCG ACGCCCTTAA AAGAATTCCG
GGGATCAGCG TTTTTAATGA CCAGGGTGAA GCGAGATTCG GCCATGTACG AGGAACAGAG
CCCCGTTTCA ACTCTGTCAC CGTCAACGGA GAACGCATTC CTTCTGCTGA GGCAGAGAAC
AGGACAATCC AGCTCGACCT CGTTCCATCG GACATGATCC AGACCATCGA GGTCACCAAA
GCCTTGACAC CCGACATGGA TGCCGACGCA ATCGGTGGTT CGATCAATCT TGTAACGAAA
ATCCCTGCGG AAGAAAGATT TTCGCTCTCA GCCGGTGGAG GCTTGAACTT CCTCGATGGG
ACCGGTGGCG AAAGATACCA GTTCGGCGGC ACCTACGGCA ACCGGTTCGC TGACGAAAAA
CTCGGCGTAC TTTTCAGCCT CTCTTATGAC AACAACGATT TTGGCTCTGA CAATATCGAA
GGGGAATGGG ACGCTGGTAA TGACGGCATA GAAGGAATCA AGGAGTTCCA GGTAAGAAAG
TATGATGTTC AGCGTATCCG CAGAAGTTTT TCCGGAGCGC TCGACTACCG CTTCAACGAA
AACCATATCC TCAAGTTCAA TGGTATTTAC AACTGGAGAG ACGACTTTGA AAACCGCTAC
AGGATTAAGT ACAAGGATCT CGATGAAGAT TTTGCCACGG TGGAACGTGA GACAAAAGGT
GGCACGGAGA ATGACGCCCG CCTTGAGGAT CAGCGCATGA TGTCATTCAC GCTTGGCGGC
GAGCATGATT TCGGCAAGCT GGATCTCGAC TGGCAAGCTT CATACTCAAA AGCTTCGGAA
GATCGTCCGA ATGAACGATA CATTAATTTC AGAGCGAAAA ACCAGCCGTT TACCGTCGAT
ATCAGCAACC CGGAAAAACC GTTTGTAACG GTCTTGAACC CGGATGTGTC AGGCGGTATC
AGCGACAGCG AAGACTGGAA GCTCAAGGAG CTGACAGAAG AACATCAGTA CACCGAAGAT
ATCGACAAGA ATTTCGGCCT GAACTTTAAC TATGCTGCAA CCGACGCACT TGCATTCAAA
TTCGGCGGTA AAATCAGGGA CAAGAAAAAG AAGCGTGATA ACGATTTTTA CGAATATGAA
CCGGTTGATG AAGATGCATT CCGCGATGAA GTCTTTGCCA ACCTCAAAAA TGAAACCAAG
GATCATTTTC TTCCGGGTAA CAAATACAAG TCAGGTGTCT TTGTTTCCAA CAAGTTTCTG
GGCGGCCTCG ACCTAGACGG CGATGATTTC GACAAGGAAC TTGTAAAGGA AGGGCTTGCC
GGAAACTTCG ACGCAAAGGA ACAGATAAAA GCGGTCTACG CAATGGCAAC CTGGGACATC
AGCGACAACA CAACACTGCT TGGAGGTGCA AGGCTTGAGC ATACCAGAAA TGAATACGAT
GCATTCAAGT ACTTTGCCGA CGAAGACTCA CTTGCTGCAG TAACAGGCAA GCCGTCTGAC
TACACCAACG TTTTGCCTTA TGTACATCTG CGTTATAACG TCAACGATCA GACAAATATC
AAGCTTGCCT ATACGCACAG TCTTGCTAGA CCAAACTATT TCGATCTGGC CCCGTACCAG
GAAATCGTTG CCGAAGACGA GGAAATAAAA TTAGGCAATC CGGCACTTGA ACCGACCCTC
TCGAAAAACG TCGACCTGAT GATCGAGCAT TACCTGAGCG ATATCGGCAT TCTTTCTGCC
GGCGTCTTCT ACAAGTCGAT CAGCGACTTC ATTGTCACCA AAAAAGAAGA CGTCGATTAT
TCGGGAGACA CGTTTGAGCA ATTCCAGCCG GTCAATGCCG GTGACGGAAC ACTTATGGGC
ATAGAAACTG CCGCACAGTT CCAGCTTCCT TTCATCCCGG GCCTTGGCCT TTACCTGAAC
TATACCTACA CGCACTCTGA AATCGACAAC TTCGATATCA AGGGACGTGA AGGCGACGAC
CTGCCGCTGC CAGGCAACCC GGAGCACACA GCAAATGCGT CGATCGCTTA CGAGAACGGT
CCGTTCAATA TCCGTCTCTC AGGAAACTAT CACAGCGACT TCATCGATGC TGAAGAGGGA
TCGATCGGCG AGAACAAGTG GGAGGACCGC TACTACGACA GCTCATTCAC TCTCGACCTC
AATGGCGGCT ACCGCATGAG CGACATAGTC CAGCTATACT TCGAGGTCAG CAACCTGACA
AACCAGCCGC TGCGCTTCTA TCAGGGTGAA AAGCAGTATC TCGCCCAGGA AGAATGGTAT
GACCGAAGGT TCCTGGTTGG CGTCAAGGCT GATTTCTGA
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| Protein sequence | MLFHTSLTDP LHNRHRRLFA GKSKRDILFA TWISLSFHRG FPTLTENTMR HLFSYLFICL
TTLACHGFAA PGIAQAETTG SSSGTTITGR VVDEVDGLPL PGANISVKGT SKGSITGQDG
RYRLENVSGA TAVIEASYIG YVKSDIPITL SPGKAVIKNI RLKPGVLISE EITVVGELLK
GQAKALNQQK NDVNVTNVVA SDQIGKFPDS NIGDALKRIP GISVFNDQGE ARFGHVRGTE
PRFNSVTVNG ERIPSAEAEN RTIQLDLVPS DMIQTIEVTK ALTPDMDADA IGGSINLVTK
IPAEERFSLS AGGGLNFLDG TGGERYQFGG TYGNRFADEK LGVLFSLSYD NNDFGSDNIE
GEWDAGNDGI EGIKEFQVRK YDVQRIRRSF SGALDYRFNE NHILKFNGIY NWRDDFENRY
RIKYKDLDED FATVERETKG GTENDARLED QRMMSFTLGG EHDFGKLDLD WQASYSKASE
DRPNERYINF RAKNQPFTVD ISNPEKPFVT VLNPDVSGGI SDSEDWKLKE LTEEHQYTED
IDKNFGLNFN YAATDALAFK FGGKIRDKKK KRDNDFYEYE PVDEDAFRDE VFANLKNETK
DHFLPGNKYK SGVFVSNKFL GGLDLDGDDF DKELVKEGLA GNFDAKEQIK AVYAMATWDI
SDNTTLLGGA RLEHTRNEYD AFKYFADEDS LAAVTGKPSD YTNVLPYVHL RYNVNDQTNI
KLAYTHSLAR PNYFDLAPYQ EIVAEDEEIK LGNPALEPTL SKNVDLMIEH YLSDIGILSA
GVFYKSISDF IVTKKEDVDY SGDTFEQFQP VNAGDGTLMG IETAAQFQLP FIPGLGLYLN
YTYTHSEIDN FDIKGREGDD LPLPGNPEHT ANASIAYENG PFNIRLSGNY HSDFIDAEEG
SIGENKWEDR YYDSSFTLDL NGGYRMSDIV QLYFEVSNLT NQPLRFYQGE KQYLAQEEWY
DRRFLVGVKA DF
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