Gene Cphamn1_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1533 
Symbol 
ID6375211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1655944 
End bp1656531 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content48% 
IMG OID642684026 
Productelectron transport complex, RnfABCDGE type, A subunit 
Protein accessionYP_001959940 
Protein GI189500470 
COG category[C] Energy production and conversion 
COG ID[COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 
TIGRFAM ID[TIGR01943] electron transport complex, RnfABCDGE type, A subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0438997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.98385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAC TATCAGGACT TCTGCTGGTC ATAGTCAGCG CGATATTCGT CAATAACGTT 
GTTTTTGCCC GTTTTCTCGG CATCTGTCCT TACCTCGGTG TTTCGAGAAA ACTGGATACC
GCCCTCGGTA TGGGCTTTGC CGTCACCTTC GTTATGACTA TCGCCACTGC CATTGGATAC
GTTTTGCATT ACGGTATACT GGTACCCTTC AAAATAGAGT TCATGCAGAC GATCATGTTT
ATCCTCGTGA TCGCCTCTCT CGTTCAGCTT GTTGAAATCG TTTTGAAGAA AGTGAGCAAA
TCTCTCTACA ACTCGCTTGG GATTTTCCTG CCGCTTATCA CCACCAACTG CGCTATCCTC
GGTGTTGCCC TGATTGCCAT ACAGGAAGAC TATTCGTTCG TCACCTCGGT GGTATTCGCC
TTTTTCTCTG CAATGGGCTT TATTCTCGCC ATTCTCCTGT TTGCAGGCAT CAGGGAAAAA
CTCGAAGAAG CCGACGTACC GAAACCCTTC AAAAATGTTC CGATCGGTTT CATATCAGCA
GCTATCCTGT CCCTTGCGTT CATGGGCTTC TCCGGCCTGG TGAAGTAA
 
Protein sequence
MNELSGLLLV IVSAIFVNNV VFARFLGICP YLGVSRKLDT ALGMGFAVTF VMTIATAIGY 
VLHYGILVPF KIEFMQTIMF ILVIASLVQL VEIVLKKVSK SLYNSLGIFL PLITTNCAIL
GVALIAIQED YSFVTSVVFA FFSAMGFILA ILLFAGIREK LEEADVPKPF KNVPIGFISA
AILSLAFMGF SGLVK