Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1523 |
Symbol | |
ID | 6375201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1645826 |
End bp | 1646725 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642684016 |
Product | periplasmic binding protein |
Protein accession | YP_001959930 |
Protein GI | 189500460 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.137922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA CCTTGACTCC CTATAACGGC GTTTCCCTTC TGTTCATACT CTTGTACGCA TCTCTTTTCG GGTGCACTGA AGCAGAGAAC AGGCAGACAA CACAACCGGA TTCTGACAAA CCGAAAATTG TCAGCCTGGC TCCAAGCATT ACAGAAATGA TCTATGCGAT TGGAGCGGAA AAACAGCTCA TAGGCAGAAC AAGTGCATGC GACTGGCCGA AAGGTGTAGA AAAAATTCAG GTTGTCGGAG CATTCGGGAA ACCGTCCCTT GAAGTACTCG CCAGTCTTTC ACCGGATCTT GTACTCGATA CCGATCTTGC AGATGAAAAC GTGGGATCAA AAATAACTGA ACTTGGCTTT CAACGTGAAA GACTGGCTAT CAGTGTTCCC GGCGACATTC CTCCGGCTCT GAGACGACTG GGCAGACTGA CCGGAAACCC GGAAAAAGCA GACAGCCTGG CTCTGGTTAT TGAAGATGAC CTGAAACAGT TTCTGGAACG GGCAAAACGC CTGAAATATT CCCCGAACGT GTACCTGGAG ATTTGGGATG ACCCGCTCTG GACAGGAGGC AAGAACAGCT ATGTCTCTGC TCTTATCGCC TATGCGGGTG GAAAAAATAT CGGCAACAGC GTTCAGAAGG AATACTTTGA AGTCTCACCG GAATGGGTCA TACAGCAGAA CCCTGACATC ATCCTCTGTA TGTATATGTC AAGGGAAGAG GATGTCATAG AAAAAGTACG ATCCAGACCG GGATGGGAGC TGATCAATGC GATAAAGCGC GGAAACATCC ACGATAATTT TGACAACAGT ATTTTTCTCC GTCCCGGGCC CAGGGTTCTT GAAGGAATTG AACAGCTCAC ACAAATTCTC GATGCGGCAA GTGATGAACA AAGGAAATGA
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Protein sequence | MKTTLTPYNG VSLLFILLYA SLFGCTEAEN RQTTQPDSDK PKIVSLAPSI TEMIYAIGAE KQLIGRTSAC DWPKGVEKIQ VVGAFGKPSL EVLASLSPDL VLDTDLADEN VGSKITELGF QRERLAISVP GDIPPALRRL GRLTGNPEKA DSLALVIEDD LKQFLERAKR LKYSPNVYLE IWDDPLWTGG KNSYVSALIA YAGGKNIGNS VQKEYFEVSP EWVIQQNPDI ILCMYMSREE DVIEKVRSRP GWELINAIKR GNIHDNFDNS IFLRPGPRVL EGIEQLTQIL DAASDEQRK
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