Gene Cphamn1_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1456 
Symbol 
ID6375134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1579456 
End bp1580445 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content45% 
IMG OID642683949 
Producttransposase IS4 family protein 
Protein accessionYP_001959863 
Protein GI189500393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAG GTGACTCATT CGTCGTTGAA ACCAATGTTC ATTTTCCTGC CGATACGTCC 
CAGTTGTTCG ATGCCATACG CAAAGTTATA GAATTAACCG CAAAATTGAG CATCCTGCAG
GGCCTCAGTC AATGGCGTCA ATACCGGCAT GTGATTCTGG GCCTGAAAAG AGATCTTCGG
GTTGTGCAAA AGCTGAAGCA CTCAACAAGC GGGGATGCTG AAAAGCAAGA AAAAGCCAAT
AAGGCAATAA AACAGGCCTA TCTGAACTAT TGTGGCAACG TTGAATATCA ACTGCTCAGG
GCTAAGATAA CGGTCGATGA ATCGAAAGAG AACGATTCTC TATTGTTATC TAAAATAAGC
AGTTACATTA CCCATGCCGA AATCCAGCTC GATCAGATAC ATCGTCGGAT ATTCATGAAT
GAAAAGATTC CACATGGAGA AAAAGTATTT TCAGTATTCG AACCACATAC CGAGTGGATC
AGTAAAGGAA AAATCGGTGT GCCCGTTGAA TTGGGATTGA ACGTCTGTAT AATACAAGAT
CAGTACCAGT TTATCCTGCA TCATCACGTG ATGGAAAAAG TTACTGATAG CGAGATTGCC
GTCTCGATAG TCAAAGAGAC GAAAAGCCGA TTTACGAATT TGCGAGCAAT CAGCTTCGAT
AAAGGATTTC ATAGTCCCGA TAACCAGAAA GCACTCAAAG AACTTGTTGC TGTCGTGGTG
CTCCCCAAAA AAGGAAACCG GTCAGCGAGT GACAAAGCAA GAGAGACGGC ACCGGAATTC
AAACGATTGA GAAAGAAGCA TTCGGCAGTT GAGTCCGGTA TCCATGCACT TGAAGTGCAT
GGGCTGGATA TCTGCCCGGA TCACGGAATA GACGGATTCA AACGATATGT TTCGCTCAGT
GTCCTGGCAT ACAATATACA TCGACTCGGA GCGCTGCTGC AGAAACAAGA CATGAGGCGA
TACCGGCGAC GGCTCAGACA AGCCGCCTAA
 
Protein sequence
MARGDSFVVE TNVHFPADTS QLFDAIRKVI ELTAKLSILQ GLSQWRQYRH VILGLKRDLR 
VVQKLKHSTS GDAEKQEKAN KAIKQAYLNY CGNVEYQLLR AKITVDESKE NDSLLLSKIS
SYITHAEIQL DQIHRRIFMN EKIPHGEKVF SVFEPHTEWI SKGKIGVPVE LGLNVCIIQD
QYQFILHHHV MEKVTDSEIA VSIVKETKSR FTNLRAISFD KGFHSPDNQK ALKELVAVVV
LPKKGNRSAS DKARETAPEF KRLRKKHSAV ESGIHALEVH GLDICPDHGI DGFKRYVSLS
VLAYNIHRLG ALLQKQDMRR YRRRLRQAA