Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1456 |
Symbol | |
ID | 6375134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1579456 |
End bp | 1580445 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642683949 |
Product | transposase IS4 family protein |
Protein accession | YP_001959863 |
Protein GI | 189500393 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGAG GTGACTCATT CGTCGTTGAA ACCAATGTTC ATTTTCCTGC CGATACGTCC CAGTTGTTCG ATGCCATACG CAAAGTTATA GAATTAACCG CAAAATTGAG CATCCTGCAG GGCCTCAGTC AATGGCGTCA ATACCGGCAT GTGATTCTGG GCCTGAAAAG AGATCTTCGG GTTGTGCAAA AGCTGAAGCA CTCAACAAGC GGGGATGCTG AAAAGCAAGA AAAAGCCAAT AAGGCAATAA AACAGGCCTA TCTGAACTAT TGTGGCAACG TTGAATATCA ACTGCTCAGG GCTAAGATAA CGGTCGATGA ATCGAAAGAG AACGATTCTC TATTGTTATC TAAAATAAGC AGTTACATTA CCCATGCCGA AATCCAGCTC GATCAGATAC ATCGTCGGAT ATTCATGAAT GAAAAGATTC CACATGGAGA AAAAGTATTT TCAGTATTCG AACCACATAC CGAGTGGATC AGTAAAGGAA AAATCGGTGT GCCCGTTGAA TTGGGATTGA ACGTCTGTAT AATACAAGAT CAGTACCAGT TTATCCTGCA TCATCACGTG ATGGAAAAAG TTACTGATAG CGAGATTGCC GTCTCGATAG TCAAAGAGAC GAAAAGCCGA TTTACGAATT TGCGAGCAAT CAGCTTCGAT AAAGGATTTC ATAGTCCCGA TAACCAGAAA GCACTCAAAG AACTTGTTGC TGTCGTGGTG CTCCCCAAAA AAGGAAACCG GTCAGCGAGT GACAAAGCAA GAGAGACGGC ACCGGAATTC AAACGATTGA GAAAGAAGCA TTCGGCAGTT GAGTCCGGTA TCCATGCACT TGAAGTGCAT GGGCTGGATA TCTGCCCGGA TCACGGAATA GACGGATTCA AACGATATGT TTCGCTCAGT GTCCTGGCAT ACAATATACA TCGACTCGGA GCGCTGCTGC AGAAACAAGA CATGAGGCGA TACCGGCGAC GGCTCAGACA AGCCGCCTAA
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Protein sequence | MARGDSFVVE TNVHFPADTS QLFDAIRKVI ELTAKLSILQ GLSQWRQYRH VILGLKRDLR VVQKLKHSTS GDAEKQEKAN KAIKQAYLNY CGNVEYQLLR AKITVDESKE NDSLLLSKIS SYITHAEIQL DQIHRRIFMN EKIPHGEKVF SVFEPHTEWI SKGKIGVPVE LGLNVCIIQD QYQFILHHHV MEKVTDSEIA VSIVKETKSR FTNLRAISFD KGFHSPDNQK ALKELVAVVV LPKKGNRSAS DKARETAPEF KRLRKKHSAV ESGIHALEVH GLDICPDHGI DGFKRYVSLS VLAYNIHRLG ALLQKQDMRR YRRRLRQAA
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