| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1447 |
|---|
| Symbol | |
|---|
| ID | 6375125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1570930 |
|---|
| End bp | 1571946 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642683941 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001959855 |
|---|
| Protein GI | 189500385 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.375364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAACA CGCTTCTCAA ACTGCTTACC CCTCTCTTTG CTGTTGTTTC CGCGCTCATT
GTCAGCGCCT TGTTCATCAT GGCGACCGGA CGAAATCCAC TGGACATCTA TCAGAAAATG
TTTTCCATGA CATTCGGTTC TGACTACGGA ACGGGCCAGA TTGTCTTCCG GACAACCTCT
CTCATCCTGA CAGGACTTGC CGTTGCCATT CCGTTTAAAG TGAAGCTTTT CAATATCGGC
GGCGAGGGCC AGGTTCTTGC GGGTGCACTT GCTGCCGCGA CAACAGGCAT TCTCCTTCCA
TCCCAGACGC CTCCGCTTGT GGCGATATCC ATATGCACCC TGACGGCCAT GATGGCGGGA
AGTGCCGTCG CCCTCTTTGC CGGCTGGCTG AAAGTGCGCT TCAGTGTCAA TGAAGTCATA
TCGACAATCA TGCTCAACTT CATCGTTCAG GCTTTCGTCG GCTATATGCT TACCTGGCAT
CTGGCTGTCC CCTCGACCGT GCATACACCG GAGATCATTC AATCAGCACA GCTGCCCATG
TTTGACAGCG TCATCGGAAT CTGGAACAAA TCACCGGCAA ACTTCAGCAC GCTGCTTGCT
CTTGCCTCTT GTCTGGGCGC CTGGGTCATG ATGTTCAAAA CCACGGCCGG TTATGAAATG
AGAGCCGTTG GCCTCCAGCC CGAAGCGGCT GAATATGGCG GCATCAATCC AAACAAGCTC
ATCCTCAAAG CGATGGCAAC GGGCGGTGCC ATGGCAGGTC TTGCATCAAC CAATCTCGTA
CTCGGTTACA AGCACTTCTA TGAAGCAGGT CTGACAAGCG GAATAGGATT TACAGGTATT
GCCGTAGCAC TGCTTGCTTT CTCCAACCCG CTCTGGATTA TCGCTTCAGC ACTGCTCTTT
GGTTTTCTTG ACTATGGAGG ATTAACGGTA AATGCCTATG TACCTAAAGA TATCTTCATG
GTGGTTCAGG CGATTACCAT CCTGATGGTA CTGGTATTGA CAAAAAAGAG CAGATAG
|
|---|
| Protein sequence | MRNTLLKLLT PLFAVVSALI VSALFIMATG RNPLDIYQKM FSMTFGSDYG TGQIVFRTTS
LILTGLAVAI PFKVKLFNIG GEGQVLAGAL AAATTGILLP SQTPPLVAIS ICTLTAMMAG
SAVALFAGWL KVRFSVNEVI STIMLNFIVQ AFVGYMLTWH LAVPSTVHTP EIIQSAQLPM
FDSVIGIWNK SPANFSTLLA LASCLGAWVM MFKTTAGYEM RAVGLQPEAA EYGGINPNKL
ILKAMATGGA MAGLASTNLV LGYKHFYEAG LTSGIGFTGI AVALLAFSNP LWIIASALLF
GFLDYGGLTV NAYVPKDIFM VVQAITILMV LVLTKKSR
|
|---|
| |