Gene Cphamn1_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1446 
Symbol 
ID6375124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1569373 
End bp1570917 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content50% 
IMG OID642683940 
ProductABC transporter-related protein 
Protein accessionYP_001959854 
Protein GI189500384 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACG TCGTGATCAG CCTGTCCGGC ATCTCCAGAT CTTTTGGAGA ATTTTATGCC 
AACAGGGATA TAGCTCTTGA TATTCGCTCA GGTTCGATTC ATGCGATTGT CGGGGAAAAC
GGAGCAGGCA AGAGCACACT GACCAAAATC ATCTACGGAC TGCTCGCGCC CTCTTCCGGT
TCTCTCTCGA TCAAGGGTAA TGCCGTACGG TTCACCTCCC CGCGCCAGGC TATCGAAGCA
GGTATCGGAA TGGTTCACCA GCACTTCATG CTGATTGAGA ATCTTACCGT TACGGAAAAC
ATCATGCTTG GTGACGAAGG GGGATCGTTT TTCGCTCCCC TGAAAACTAA AGAAGCCGCA
AGGAAGATCG TCTCCATTGC ACAGGCACAC GGATTAGATG TAGATCCTGA TTCACTGGTG
TCGGATCTTT CCGTAGGCGA AGAACAACGT GTTGAAATCC TGAAGCTGCT CTACCGCGAT
GCGGATATCC TTATTCTGGA CGAACCTACC GCGGTGCTGA CGCCATCTGA AACAAGCAGG
CTCTTCGCTA CCCTCGCCTC CCTGCGCGAT GAAGGAAAAA CAGTCATCCT CATCACACAC
AAGCTGGATG AAGTGCTTGA CGTCTCCGAC ATGGTAAGTG TCATGAGTAA AGGAAAGGTT
GTCGCCACCA AACCCACCGC TGCGGTCACG AAACCTGATC TTGCTCGACT GATGGTTGGA
AGAAGCGTAC TCTTGCGGGT CGAGAACCCT CCTGACAGGC CGGGAGAAGT CATAGTGAAA
GCCTCAGACC TCAGTTTCGT CGACAGGAAA GGTCGCAAGA GACTTACCTC CCTCGGTTTT
GAAATCAGGG CCGGAGAAAT CTACGGCATA GCCGGAGTTG AAGGCAACGG GCAGAGCGAA
CTGCTCTCCA TCCTTTGGGG TATGACAGAA CCCGGAAGCC GGATCGACGG CTCGATCACC
GTAAACGGGC TTTCTCTCAA TGAAATGAGC ACCAAGGAAA TAGCCGCCAT GGGTATTTCA
CATATTCCGG AAAATCGCCT GCGTCATGCA GTCATAAAAG AGTTCTCTGT CAGTGACAAC
ATCATTTTCG GGCGCCACAG GGAGCGCTCA TTTTCACGTT TTGCCGGATT CAACACAAAA
TCCGTACATG ACTACACAAA AAAGATAATT GACCGCTACG ACATTCGATA TGACATGCAG
AGCAATCCCC CCCTTTCAGC CCTGTCAGGC GGCAACCAGC AGAAAATCGT TCTCGGAAGG
GAAATCGAGC GTCCGGAACT GAAACTGCTC ATTCTCGCAC AACCGACAAG GGGTGTTGAT
ATCGGCGCCA TTGAAATGAT CCACAAAAAG ATCATCGAAG CGAGGGACAA GAACATCGCC
ATCCTCCTGA TCTCATCAGA ACTTGATGAA CTTATCTCCT TGTCGTCAAG AATCGGATGC
ATCTATAAAG GCTCTATACG TCACGAGTTT TCCGCAGCAG AAATCCTGAA AGGACGATCG
AGTGAACAGG ATCTGGAAAA AGAAATCGGC ATGTTCATTA CCTGA
 
Protein sequence
MNDVVISLSG ISRSFGEFYA NRDIALDIRS GSIHAIVGEN GAGKSTLTKI IYGLLAPSSG 
SLSIKGNAVR FTSPRQAIEA GIGMVHQHFM LIENLTVTEN IMLGDEGGSF FAPLKTKEAA
RKIVSIAQAH GLDVDPDSLV SDLSVGEEQR VEILKLLYRD ADILILDEPT AVLTPSETSR
LFATLASLRD EGKTVILITH KLDEVLDVSD MVSVMSKGKV VATKPTAAVT KPDLARLMVG
RSVLLRVENP PDRPGEVIVK ASDLSFVDRK GRKRLTSLGF EIRAGEIYGI AGVEGNGQSE
LLSILWGMTE PGSRIDGSIT VNGLSLNEMS TKEIAAMGIS HIPENRLRHA VIKEFSVSDN
IIFGRHRERS FSRFAGFNTK SVHDYTKKII DRYDIRYDMQ SNPPLSALSG GNQQKIVLGR
EIERPELKLL ILAQPTRGVD IGAIEMIHKK IIEARDKNIA ILLISSELDE LISLSSRIGC
IYKGSIRHEF SAAEILKGRS SEQDLEKEIG MFIT