Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1422 |
Symbol | |
ID | 6375100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1545918 |
End bp | 1546799 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642683917 |
Product | NmrA family protein |
Protein accession | YP_001959831 |
Protein GI | 189500361 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.578575 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGC AAAAGGTACT TGTTGCAGGA GCTTCCGGCT ATCTTGGAAG ACATGTCGTC AAGGAATTCG CTGAACGCGG CTACAGCGTT CGGGCGCTCG TGAGAAACCC TGAAAAGCTG GCAGCCGAAG GAGAGAATCT CGAACCTGCC GTCGCCGATC TGGTCGATGA GGTACTCACG GGCGATGCAA CCGATCTCAG CACGCTGAAA GGGGCGACCA AGGGTGTGGA TATCGTTTTT TCATGCATGG GCCTCACCAA ACCGCAGGGT AACATCACCA ACGAACAGGT CGACCATCTC GGCAACAGGG CCCTGCTTGA AGACGCGCTC TCCAACGGGG TGAAAAAGTT CATCTACGTC TCGGTCTTCA ACGCCGAAAA GACACACGAC GTCGAAGTGG TCAGTGCACA CGAGCGTTTC GTGGAGGACC TCAAGTCCTC CTCCATGCCC CACACCGTCA TCCGGCCGAC CGGGTTCTTT TCGGACATGG GTATGTTTTT CTCAATGGCC CGCTCAGGCC ACATGTTCCT GCTCGGAGAG GGCACAAACC GCGTCAATCC GATTCACGGA GCCGACCTTG CAGCGATCTG CGTCGATGCA GCTGAAAAGG ATGTCCCGGA GATCCCCGCC GGCGGCCCCG ACACCTATAC CTTCAATGAA ACCGTCACGC TTGCTTTCGA GGCCCTCGGC AAAAAACCCT GGATCACCCA TGTCCCCATG TGGATCGGGG ATGCCGCGCT TTTCGTGACC GGCCTTGTCA ACAAACCGCT TGCAGGCGTC ATGTCTTTTG CAATCGCTGT CAGCAGTCTC GACAGCGTCG CACCGGCAAA AGGCACCAGA CATCTGAAGG ACTTCTACCG TGAACTGGCA GCGAAGGATT AG
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Protein sequence | MKQQKVLVAG ASGYLGRHVV KEFAERGYSV RALVRNPEKL AAEGENLEPA VADLVDEVLT GDATDLSTLK GATKGVDIVF SCMGLTKPQG NITNEQVDHL GNRALLEDAL SNGVKKFIYV SVFNAEKTHD VEVVSAHERF VEDLKSSSMP HTVIRPTGFF SDMGMFFSMA RSGHMFLLGE GTNRVNPIHG ADLAAICVDA AEKDVPEIPA GGPDTYTFNE TVTLAFEALG KKPWITHVPM WIGDAALFVT GLVNKPLAGV MSFAIAVSSL DSVAPAKGTR HLKDFYRELA AKD
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