Gene Cphamn1_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1422 
Symbol 
ID6375100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1545918 
End bp1546799 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content57% 
IMG OID642683917 
ProductNmrA family protein 
Protein accessionYP_001959831 
Protein GI189500361 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.578575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC AAAAGGTACT TGTTGCAGGA GCTTCCGGCT ATCTTGGAAG ACATGTCGTC 
AAGGAATTCG CTGAACGCGG CTACAGCGTT CGGGCGCTCG TGAGAAACCC TGAAAAGCTG
GCAGCCGAAG GAGAGAATCT CGAACCTGCC GTCGCCGATC TGGTCGATGA GGTACTCACG
GGCGATGCAA CCGATCTCAG CACGCTGAAA GGGGCGACCA AGGGTGTGGA TATCGTTTTT
TCATGCATGG GCCTCACCAA ACCGCAGGGT AACATCACCA ACGAACAGGT CGACCATCTC
GGCAACAGGG CCCTGCTTGA AGACGCGCTC TCCAACGGGG TGAAAAAGTT CATCTACGTC
TCGGTCTTCA ACGCCGAAAA GACACACGAC GTCGAAGTGG TCAGTGCACA CGAGCGTTTC
GTGGAGGACC TCAAGTCCTC CTCCATGCCC CACACCGTCA TCCGGCCGAC CGGGTTCTTT
TCGGACATGG GTATGTTTTT CTCAATGGCC CGCTCAGGCC ACATGTTCCT GCTCGGAGAG
GGCACAAACC GCGTCAATCC GATTCACGGA GCCGACCTTG CAGCGATCTG CGTCGATGCA
GCTGAAAAGG ATGTCCCGGA GATCCCCGCC GGCGGCCCCG ACACCTATAC CTTCAATGAA
ACCGTCACGC TTGCTTTCGA GGCCCTCGGC AAAAAACCCT GGATCACCCA TGTCCCCATG
TGGATCGGGG ATGCCGCGCT TTTCGTGACC GGCCTTGTCA ACAAACCGCT TGCAGGCGTC
ATGTCTTTTG CAATCGCTGT CAGCAGTCTC GACAGCGTCG CACCGGCAAA AGGCACCAGA
CATCTGAAGG ACTTCTACCG TGAACTGGCA GCGAAGGATT AG
 
Protein sequence
MKQQKVLVAG ASGYLGRHVV KEFAERGYSV RALVRNPEKL AAEGENLEPA VADLVDEVLT 
GDATDLSTLK GATKGVDIVF SCMGLTKPQG NITNEQVDHL GNRALLEDAL SNGVKKFIYV
SVFNAEKTHD VEVVSAHERF VEDLKSSSMP HTVIRPTGFF SDMGMFFSMA RSGHMFLLGE
GTNRVNPIHG ADLAAICVDA AEKDVPEIPA GGPDTYTFNE TVTLAFEALG KKPWITHVPM
WIGDAALFVT GLVNKPLAGV MSFAIAVSSL DSVAPAKGTR HLKDFYRELA AKD