Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1409 |
Symbol | |
ID | 6375087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1527516 |
End bp | 1528373 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642683904 |
Product | hypothetical protein |
Protein accession | YP_001959818 |
Protein GI | 189500348 |
COG category | [S] Function unknown |
COG ID | [COG3016] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00776677 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGAATC TTGTCGTCCT GCTCATACTT TCGTGTCTCG TCACCCCCGC ATATGGAAAG GGTAAGCCTG CATATGAAAT CTTCGATGCC GGGGGCGACA AGGCAAGCTA TCGCAAGCTT TACAAAAAAG CGAAAAAAGC TGACATCATC CTGTTCGGAG AACTGCACAA CAACCCCATT GCCCACTGGT TGCGACTGGA ACTGACCAAA GACCTTTTAA ATACCAACAA CCTCATACTC GGTGGCGAAA TGTTCGAAGC AGACAATCAG CAGGCGCTTG ACAAGTACCT CGACGGTTCG ATCAACGCAA TAGGCCTCGA TTCTCTTGCC CGGCTCTGGA CCAACCACAA AACCGACTAC ACTCCTATCG TCAAGTTGGC CAGGGAATAC AACATCCCGA TTTTCGCGAC GAACATCCCC CGACGGTTTG CCCGTATGGT CTACAGACAG GGCGACTTCG GCGTTCTGGA ACGGCTCAAC GACGAGGAAA AAGCCTGGAT CGCTCCACTC CCCATACGGT TCGATCCCGA ATTGCCACAG TACAAAAAAA TCCTCTCGAT GACAGGTGAC CACGGCACCC CCGAACTGGT CAGGGCTCAG GCACTCAAGG ACGCCACCAT GGCGCATTTC ATCCTTCTGA ACTACCGCCC CGGCCATACC TTCCTGCACC TCAATGGCTC CTACCATTCG GATTTTTACG AGGGCATCGT CTTCTATCTG CGGGAACGTA ACGACACCCT GCGCATCCTG ACCGTCTCGA CAGTCGAGCA GGAGAACGTT CGCCGTCTGG AAGAGGGGAA CAGGGGCCGG GCGGATTTCA TCATCTGCGT GGACGAGGAT ATGACGAAAA CACACTGA
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Protein sequence | MLNLVVLLIL SCLVTPAYGK GKPAYEIFDA GGDKASYRKL YKKAKKADII LFGELHNNPI AHWLRLELTK DLLNTNNLIL GGEMFEADNQ QALDKYLDGS INAIGLDSLA RLWTNHKTDY TPIVKLAREY NIPIFATNIP RRFARMVYRQ GDFGVLERLN DEEKAWIAPL PIRFDPELPQ YKKILSMTGD HGTPELVRAQ ALKDATMAHF ILLNYRPGHT FLHLNGSYHS DFYEGIVFYL RERNDTLRIL TVSTVEQENV RRLEEGNRGR ADFIICVDED MTKTH
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