Gene Cphamn1_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1409 
Symbol 
ID6375087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1527516 
End bp1528373 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content54% 
IMG OID642683904 
Producthypothetical protein 
Protein accessionYP_001959818 
Protein GI189500348 
COG category[S] Function unknown 
COG ID[COG3016] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00776677 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAATC TTGTCGTCCT GCTCATACTT TCGTGTCTCG TCACCCCCGC ATATGGAAAG 
GGTAAGCCTG CATATGAAAT CTTCGATGCC GGGGGCGACA AGGCAAGCTA TCGCAAGCTT
TACAAAAAAG CGAAAAAAGC TGACATCATC CTGTTCGGAG AACTGCACAA CAACCCCATT
GCCCACTGGT TGCGACTGGA ACTGACCAAA GACCTTTTAA ATACCAACAA CCTCATACTC
GGTGGCGAAA TGTTCGAAGC AGACAATCAG CAGGCGCTTG ACAAGTACCT CGACGGTTCG
ATCAACGCAA TAGGCCTCGA TTCTCTTGCC CGGCTCTGGA CCAACCACAA AACCGACTAC
ACTCCTATCG TCAAGTTGGC CAGGGAATAC AACATCCCGA TTTTCGCGAC GAACATCCCC
CGACGGTTTG CCCGTATGGT CTACAGACAG GGCGACTTCG GCGTTCTGGA ACGGCTCAAC
GACGAGGAAA AAGCCTGGAT CGCTCCACTC CCCATACGGT TCGATCCCGA ATTGCCACAG
TACAAAAAAA TCCTCTCGAT GACAGGTGAC CACGGCACCC CCGAACTGGT CAGGGCTCAG
GCACTCAAGG ACGCCACCAT GGCGCATTTC ATCCTTCTGA ACTACCGCCC CGGCCATACC
TTCCTGCACC TCAATGGCTC CTACCATTCG GATTTTTACG AGGGCATCGT CTTCTATCTG
CGGGAACGTA ACGACACCCT GCGCATCCTG ACCGTCTCGA CAGTCGAGCA GGAGAACGTT
CGCCGTCTGG AAGAGGGGAA CAGGGGCCGG GCGGATTTCA TCATCTGCGT GGACGAGGAT
ATGACGAAAA CACACTGA
 
Protein sequence
MLNLVVLLIL SCLVTPAYGK GKPAYEIFDA GGDKASYRKL YKKAKKADII LFGELHNNPI 
AHWLRLELTK DLLNTNNLIL GGEMFEADNQ QALDKYLDGS INAIGLDSLA RLWTNHKTDY
TPIVKLAREY NIPIFATNIP RRFARMVYRQ GDFGVLERLN DEEKAWIAPL PIRFDPELPQ
YKKILSMTGD HGTPELVRAQ ALKDATMAHF ILLNYRPGHT FLHLNGSYHS DFYEGIVFYL
RERNDTLRIL TVSTVEQENV RRLEEGNRGR ADFIICVDED MTKTH