Gene Cphamn1_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1392 
Symbol 
ID6375070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1507155 
End bp1507424 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content45% 
IMG OID642683887 
ProductRNP-1 like RNA-binding protein 
Protein accessionYP_001959801 
Protein GI189500331 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000190115 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000764419 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAACATTT ATATTGGCAA TTTGGATTAC GGCGTAAGTG AAGAAGATTT GCGCGAAGCT 
TTTGGCGAGT TTGGAGAAGT CTCCAGCGCA AACATCATTT CTGACAAATT CACAGGCCGT
TCCAAAGGTT TTGGTTTTGT TGAAATGCCG AATGACGCAG AAGCAAACCA GGCAATCGAT
GCATTGAACG ATACCGACCT TAATGGTCGT TCTATCAAGG TCAACCAGGC AAGACCTCGC
GAAGAACGTC CGTCAAGACC TCGTTACTGA
 
Protein sequence
MNIYIGNLDY GVSEEDLREA FGEFGEVSSA NIISDKFTGR SKGFGFVEMP NDAEANQAID 
ALNDTDLNGR SIKVNQARPR EERPSRPRY