| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1380 |
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| Symbol | |
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| ID | 6375058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1496633 |
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| End bp | 1498579 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642683876 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001959790 |
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| Protein GI | 189500320 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.252149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000910515 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCAGC ATGTCTTTGT TGTTATGCCC TTCGGCAGTA AGGAAGGTAT CCATTTCGAC
AACGTTTATA GCGAGTATCT TCATCCCGCT CTGTCTGAAG AAGGGTTCAC CGTCTTGAGG
GCGGATGAAG AAACAAGCGC TGGTGAAATA CGAGAAGAGA TGTTTCAGGA GCTGCTGCTG
GCGGATCTCG TTATCGCTGA CCTCTCCATA GACAATCCAA ACGTCTGGTA TGAACTCGGA
GTGCGGCACG CGTTACGGGC TCGTGGCATC ATTCTGGTTC AGAGCCAACG GAAAAAACAA
CCGTTTGACG TCTACACAGA GCGTAAGCTG CGATATCATC TCAAAGATGG CAGACCTGAT
CCGGCCTTTG TTGAACATGA CAAAAAGGCG CTGGCTGCAA TGGCAAACAA GACCATATCC
TGCTGGAAGG GGAAGAAAAT CAGTCCTGTG TTCAATCTGC TTCCCTACCT GCATGAGCCG
GACTGGAAAT CCCTGAGAGT CGGGAGAGTA AAAGAATTCT GGGAACAGCA CGATGCCTGG
GCAGACCGCG TGGAACTTGC CCGACAAGAA GGGCACACTG GGGATATTCT TCTGCTTGCC
GACGAAGCAC CTGTTTCCGC TTTTCGTTCA GAGGCATGGA TCACGGCAGG AAAAGCCCTG
CGTAAAGCTG AACACTTCGA CTTTGCGCTT GAACAACTTG AGCGAGGCCT TGAGATCAAT
CCCGAAAGCC TTGAAGGAGA GCATGAAAAA GGCATCTGCC TCCAGAGACT TGCCGCAGCA
GGAAAAGCCG GGTATTCCCT CGATCGTGCC AGAATGCACT ACACGAACGT ACTTAAAAAG
AGCACCTCGC AAAATCCTGA AACCTGGGCC CTGCTCGGAC GCGTTGACAA GGACGCATGG
ATTGCCATGT GGCGCCGTCA CGACATCTCC CCGGAAGAGA TGCTGCTGGA AGCTACAGAG
GAAGGCGCCT TGTTACGCAA AGCCATAGAA AGTTACCGCA AAGGATTCCG AATCAACCCG
GCTCATTACT ATTCCGGTAT CAACGCTCTC ACACTCATGC ATCTCTATCG CCACCTGACA
AAAGACTCCC GCTACGATAA AGAGTTCGAT CCTATGGCAG GGGCCCTCAG ATATGCGACA
CAATGCGAAC AGAATTACTG GGCAGCCGTA ACCATCGGAG ACCTTGAAAT ACTTGTCGGG
ACGCCTGAAT CCGTCAGGAC AGCCTACAAG GCAGCCATTG GGTTCAATAA ACGTGACTGG
TTCGAACTCC ACTCAAGCCT CGATCAACTG CGAATTCTCA GGCATCTGGA TTTTCATTCT
GAGAACGTAG ACGCCGGTAT CACGATCTTT GAGCGGGCAC TGAAAAAACT GAAGAAACCT
GAAAAAAAGC CTGAAAAGAT CTTTCTGTTC AGCGGACATA TGATCGATCG CCCAGACAGG
GCAGAACCCC GGTTTCCTGC TGAAAAAGAA GATCGAGCCG CAGGAAAAAT CGCCACTATT
CTTGACGAGT TTGACGCAGG ATCTGACGAT CTCGCGCTGA CACAGGGAGC GTGCGGAGGA
GACCTGCTCT TTACGGAAGC ATGCCAGGAA CGTGCTGTAA GCGTTCACTG GATGCAACCT
TTTTCTGAGC CGGAATTTAT CCGGAATTCA GTGGATCACG GAGGCGACAT ATGGCGTAAA
AGATATCACG ATGCCAAAAG CAGGCTCGCC AAGCCTTTAC GATCAGCCCC GACTGCATTG
GGTGACCCCC CGTCCGATAG CAATCCGTAC GAGCGATGCA ATCTCTGGCT GCTCTATACG
GCTCTCTCCT ACGGTGTCGA CCAGGTACAC TTCATCTGCC TCTGGAACGG AGAAGACGGC
GACGGCCCGG GTGGAACAGC GCACATGTAC AACGTTGTGA AAAGGAAAAC AGGAAACGTC
TCATGGATTG ACACCAGAAA CCTCTGA
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| Protein sequence | MIQHVFVVMP FGSKEGIHFD NVYSEYLHPA LSEEGFTVLR ADEETSAGEI REEMFQELLL
ADLVIADLSI DNPNVWYELG VRHALRARGI ILVQSQRKKQ PFDVYTERKL RYHLKDGRPD
PAFVEHDKKA LAAMANKTIS CWKGKKISPV FNLLPYLHEP DWKSLRVGRV KEFWEQHDAW
ADRVELARQE GHTGDILLLA DEAPVSAFRS EAWITAGKAL RKAEHFDFAL EQLERGLEIN
PESLEGEHEK GICLQRLAAA GKAGYSLDRA RMHYTNVLKK STSQNPETWA LLGRVDKDAW
IAMWRRHDIS PEEMLLEATE EGALLRKAIE SYRKGFRINP AHYYSGINAL TLMHLYRHLT
KDSRYDKEFD PMAGALRYAT QCEQNYWAAV TIGDLEILVG TPESVRTAYK AAIGFNKRDW
FELHSSLDQL RILRHLDFHS ENVDAGITIF ERALKKLKKP EKKPEKIFLF SGHMIDRPDR
AEPRFPAEKE DRAAGKIATI LDEFDAGSDD LALTQGACGG DLLFTEACQE RAVSVHWMQP
FSEPEFIRNS VDHGGDIWRK RYHDAKSRLA KPLRSAPTAL GDPPSDSNPY ERCNLWLLYT
ALSYGVDQVH FICLWNGEDG DGPGGTAHMY NVVKRKTGNV SWIDTRNL
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