Gene Cphamn1_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1378 
Symbol 
ID6375056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1494711 
End bp1495301 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content49% 
IMG OID642683874 
Productprotein of unknown function DUF218 
Protein accessionYP_001959788 
Protein GI189500318 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.2531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00903728 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGCAT TCCTGAAAAA AGCTTTTCTT CTGCTTCTTG CCTCAAGCGT AATCGGAGTA 
CTTGTCTTCG CCGGATTGGG GTATCTTGTG TCAAGCTATC AGAGCAAACC GGAAAAAGCC
GATGTCATCA TCGTGCTCGG AGGAGATGAC GGACCAAGAG TCGATAAGGG AGGCAGTCTC
TTCAATGCAG GATATGCTCC AAACGTTGTG TTGACCGGAA TAGACAGCAG GTATTACCGG
CCCTCCCGTC CCAACTGGCG GGAAAGGCGT CTTGCAGAAG CCGGTGTTCC TCAAACAGCC
ATCAACGTCG ATACAACCTC TGAGACTACC TGGGAAGAAG CGTTGAATTC TGTTGCCATG
ATGCAGGAAA AAGGCTGGAA CAACGCAATT GTAGTAAGTG ATCCTCCACA TATGCTGCGC
CTGCACAGCA CCTGGAAAAG AGCTTTTAAG GGCTCATCAA AATCCTTCAT CCTTGTCGCG
ACCAGTCCTG AATGGTGGAA GCCGCACCTC TGGTGGCAAA ACGAAACAAG CTATCGCTTT
GTCATCAGCG AAATCAAGAA AAATATATAC TACAGGGTAG TCTACTTCTG A
 
Protein sequence
MKAFLKKAFL LLLASSVIGV LVFAGLGYLV SSYQSKPEKA DVIIVLGGDD GPRVDKGGSL 
FNAGYAPNVV LTGIDSRYYR PSRPNWRERR LAEAGVPQTA INVDTTSETT WEEALNSVAM
MQEKGWNNAI VVSDPPHMLR LHSTWKRAFK GSSKSFILVA TSPEWWKPHL WWQNETSYRF
VISEIKKNIY YRVVYF