Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1378 |
Symbol | |
ID | 6375056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1494711 |
End bp | 1495301 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642683874 |
Product | protein of unknown function DUF218 |
Protein accession | YP_001959788 |
Protein GI | 189500318 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.2531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00903728 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGGCAT TCCTGAAAAA AGCTTTTCTT CTGCTTCTTG CCTCAAGCGT AATCGGAGTA CTTGTCTTCG CCGGATTGGG GTATCTTGTG TCAAGCTATC AGAGCAAACC GGAAAAAGCC GATGTCATCA TCGTGCTCGG AGGAGATGAC GGACCAAGAG TCGATAAGGG AGGCAGTCTC TTCAATGCAG GATATGCTCC AAACGTTGTG TTGACCGGAA TAGACAGCAG GTATTACCGG CCCTCCCGTC CCAACTGGCG GGAAAGGCGT CTTGCAGAAG CCGGTGTTCC TCAAACAGCC ATCAACGTCG ATACAACCTC TGAGACTACC TGGGAAGAAG CGTTGAATTC TGTTGCCATG ATGCAGGAAA AAGGCTGGAA CAACGCAATT GTAGTAAGTG ATCCTCCACA TATGCTGCGC CTGCACAGCA CCTGGAAAAG AGCTTTTAAG GGCTCATCAA AATCCTTCAT CCTTGTCGCG ACCAGTCCTG AATGGTGGAA GCCGCACCTC TGGTGGCAAA ACGAAACAAG CTATCGCTTT GTCATCAGCG AAATCAAGAA AAATATATAC TACAGGGTAG TCTACTTCTG A
|
Protein sequence | MKAFLKKAFL LLLASSVIGV LVFAGLGYLV SSYQSKPEKA DVIIVLGGDD GPRVDKGGSL FNAGYAPNVV LTGIDSRYYR PSRPNWRERR LAEAGVPQTA INVDTTSETT WEEALNSVAM MQEKGWNNAI VVSDPPHMLR LHSTWKRAFK GSSKSFILVA TSPEWWKPHL WWQNETSYRF VISEIKKNIY YRVVYF
|
| |