Gene Cphamn1_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1351 
Symbol 
ID6375029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1467363 
End bp1469195 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content50% 
IMG OID642683848 
ProductATP-citrate lyase/succinyl-CoA ligase 
Protein accessionYP_001959762 
Protein GI189500292 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit
[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATTG TAATTAATAA AGAGACAAGA GCTGTTATCA TTGGTGGAGC AGCTGGTTTG 
AGCGCGGCAA GGAAAATGGC TGAGTTCGAT TTCCTTGTAA AGCGCCCATT GACCGTACAG
GCATTTGTTT ATCCTCCGGA AGAAGGACAG CAGAAAGAGA TTTTTCTTGG CGGCGAACTG
AAAAACGTCA AGGTGTATTC GACGCTTCAG AAAGCACTTG CAGACAATCC GCAGATCAAC
ACTGCGCTGG TCTATCTTGG TGCTTCACGA GCCACACAGG CGACTCAGGA GGCTCTTGAG
TCGGAACATA TCAGCCTTGT GTCGGTCATT ACCGAAGGGG TTCCTGAAAA AGACGCGAAA
AAACTTCGCC TGCTTGCCGA GAATAACGGG AAAGTTCTTA ACGGCCCTTC CTCGATCGGC
ATTATGTCCG CTGGAGAGTG TCGCCTTGGT GTTATCGGCG GCGAGTACAA GAACCTCAAG
CTTTGTAATC TCTACAGACC TGGATCATTT GGTGTTCTGA CAAAATCAGG CGGACTTTCA
AACGAAGCAA TGTGGCTTTG TGCCCAGAAC GGTGACGGTA TCACCTCAGC AGTAGCCGTC
GGTGGAGATG CGTATCCCGG TACCGACTTT GTCACCTATC TTGAAATGTT CGAAAATGAT
CCCGACACCA AGGCCGTTGT AATTATCGGC GAGGTTGGCG GATCTCTTGA AGAAGATGCT
GCCGAATGGC TTGCAGCAGA AAAACGTCGC ATCAGAGTTG TTGCCGCTAT CGGCGGTACC
TGTCAGGAAG TGCTTCCCCA GGGTATGAAA TTCGGCCATG CGGGCGCAAA AGAAGGTAAG
AAAGGTGCAG GTTCAGCACG GTCGAAAATG AATGCGCTTA GAGATGCCGG TGCGGTTGTG
CCCGACACAT TCGGTGGATT GAGCAAGGCA ATCAAGCAGG TATATGACGA GCTGCTTGCT
GACGGAACCA TTGCGCCGGA AGAAGCGATT TCCGATGATC TGCTTCCTGA TCTTCCGCCG
AAAGTACAGA AAATTATTAA AGAAGGCGAA GTTATCGTCG ATCCGCTTGT CAGAACGACT
ATCGCTGATG ATCGTGGAGA AGAGCCTCGT TATAGCGGTT ACGCTGCATC TCAACTGTGT
GAGAAAGGCT ATGGAATCGA GGATGTCATC GGTCTTCTCT GGAACAAGAA GCTTCCTACA
AAAGAGGAGT CGGAAATTGT TAAACGTATT ATCATGATTT CCGCAGACCA CGGCCCGGCG
GTTTCCGGAG CGTTTGGCAC CATCCTGGGC GCCTGTGCGG GTATTGATAT GCCTCAGGCG
GTTTCTGCAG GTATGACTAT GATCGGCCCC CGTTTCGGCG GAGCTGTAAC CAATGCCGGG
AAATATTTCC AGAAGGGTGT CAAGGATTTC CCGAATGACA TTCCCGGCTT CCTTGCCTGG
ATGAAAAAGA ACTTCGGTCC TGTTCCGGGC ATCGGCCACC GAGTCAAGAG CCTGAAAAAT
CCTGACCAGA GGGTTAAGTA CCTTGTTTCG TATGTCAAAA ATGAAACAAC GTTGCACACG
CCTTGTCTTG ACTACGCTCT TGATGTTGAA AAAGTGACCT CGGCCAAAAA GGATAATCTT
ATTCTTAACG TTGACGGTAC TATGGGCGCG ATTCTGGTTG ACCTCGGTTT CCCGGTCCAC
TCACTCAACG GGTTCTTCGT TCTGGCACGT ACCATCGGTA TGATCGGCCA CTGGATCGAT
CAGAACGAAC AGTCTTCACG TCTCATCAGA CTGTACGATT ACCTGATTAA CTACGCGGTA
GAAGACGAGA AAGAAGTACC TGATAAGAAA TAA
 
Protein sequence
MSIVINKETR AVIIGGAAGL SAARKMAEFD FLVKRPLTVQ AFVYPPEEGQ QKEIFLGGEL 
KNVKVYSTLQ KALADNPQIN TALVYLGASR ATQATQEALE SEHISLVSVI TEGVPEKDAK
KLRLLAENNG KVLNGPSSIG IMSAGECRLG VIGGEYKNLK LCNLYRPGSF GVLTKSGGLS
NEAMWLCAQN GDGITSAVAV GGDAYPGTDF VTYLEMFEND PDTKAVVIIG EVGGSLEEDA
AEWLAAEKRR IRVVAAIGGT CQEVLPQGMK FGHAGAKEGK KGAGSARSKM NALRDAGAVV
PDTFGGLSKA IKQVYDELLA DGTIAPEEAI SDDLLPDLPP KVQKIIKEGE VIVDPLVRTT
IADDRGEEPR YSGYAASQLC EKGYGIEDVI GLLWNKKLPT KEESEIVKRI IMISADHGPA
VSGAFGTILG ACAGIDMPQA VSAGMTMIGP RFGGAVTNAG KYFQKGVKDF PNDIPGFLAW
MKKNFGPVPG IGHRVKSLKN PDQRVKYLVS YVKNETTLHT PCLDYALDVE KVTSAKKDNL
ILNVDGTMGA ILVDLGFPVH SLNGFFVLAR TIGMIGHWID QNEQSSRLIR LYDYLINYAV
EDEKEVPDKK