Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1348 |
Symbol | |
ID | 6375026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1464030 |
End bp | 1464824 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642683845 |
Product | hypothetical protein |
Protein accession | YP_001959759 |
Protein GI | 189500289 |
COG category | [R] General function prediction only |
COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCCGG TTGTTGAAAT CTCGACCTGG CAGCTGCTTC TTGGGCTGAT ATTTATCATT CTGGCCCAGG GAGCATCATT CGCATATCAT CTCGGACTGA ATCGGGATAT TACTGTCGGT ACCATCAGGA CCTTTGCCCA GCTTTTTCTT ATGGGCTATG CGCTTACCCT TATTTTTCAA CTGAACTCTG TCTGGTTCAC GCTGGGAATA TTTATCATTA TGGCGGTCTC CGCATCGTTT ATTGTCAGGG GAAGGGTAAA AGAAAAGCAG ATCTCGTATA TGGTTCCGAC TTTTCTTACC ATGTTCATCA GCTATTTTGT TACCGCGATT TTTGTTTCCG GTCTTATTGT GGGAGTAGAT CCCTGGTGGG AACCGCGATA TTTTCTCCCG ATAGGCGGGA TGGTTATAGG TAATTCCATG TCAGCACTTG CTATTGCGCT CGAACGTCTG TTCAAAGAGA TCCGCCAGCA GAAAGATCTT ATTGAAACAC AGCTTTGTCT CGGGGCAAAC TACAGGGAGG CAAGTTCGGA AATGTTTAAA AATGCTGTGA CGGCCGGTAT GATTCCGTCA ATCAACGCGA TGATGGGAGT AGGCCTTGTT TTTATTCCCG GAATGATGTC CGGACAGATT CTCGCGGGCG CGGATCCACT TCAGGCAATT CGCTATCAGA TAGTGATCAT GCTCATGCTG GTGGGGTCAA CAGCGACGAC GTCCATCATT ACCATGCTCA TAGTCAGGAA ACGCTGTTTC GGCAGGGGAG AAGAACTGCT GCTGTCGACA AGCGGACGGG AGTGA
|
Protein sequence | MNPVVEISTW QLLLGLIFII LAQGASFAYH LGLNRDITVG TIRTFAQLFL MGYALTLIFQ LNSVWFTLGI FIIMAVSASF IVRGRVKEKQ ISYMVPTFLT MFISYFVTAI FVSGLIVGVD PWWEPRYFLP IGGMVIGNSM SALAIALERL FKEIRQQKDL IETQLCLGAN YREASSEMFK NAVTAGMIPS INAMMGVGLV FIPGMMSGQI LAGADPLQAI RYQIVIMLML VGSTATTSII TMLIVRKRCF GRGEELLLST SGRE
|
| |