Gene Cphamn1_1344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1344 
Symbol 
ID6375022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1459194 
End bp1459679 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content44% 
IMG OID642683841 
ProductLipocalin family protein 
Protein accessionYP_001959755 
Protein GI189500285 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.861472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAA AACTATTCAG AAAAAAAACT GCTTCCAGAG AACCGGTGAC AGTTGATTCG 
GTTGATGTGG TTAGATACTG TGGCACATGG TATGAGATAG CTTCCTATGC ACCGAAAGAG
GAACAGGGTT GCATTAAAAC AAAGGCAGAG TATACCCTTA ACAGAGAGGG GTATGTTGAT
GTAAGAAACT CATGTAAGAA AAAGGGGAGG GAGAAATCAG TCAGAGCAAA GGCTTTCTCT
GTTCCTGATA GCGGTAATGC AAAATTGAAG GTGCAGTTTT TCAGGTTTTT CAAAGGCGAT
TACTGGGTTG TCGATCTTGC TGATGATTAT TCATGGGCTG CAGTTTCGAC TCCGACATCC
GGAAGCCTGT GGATCCTGAG CAGAACGCCG TATCTACAGG AATCGGTTTA CGACATCATC
ATCGGGAGGC TTGTCGAGAA GGGTTTTGAT ACGGGCAGGC TTGTAAAAAC TGATCAAAGG
GGTTAG
 
Protein sequence
MFKKLFRKKT ASREPVTVDS VDVVRYCGTW YEIASYAPKE EQGCIKTKAE YTLNREGYVD 
VRNSCKKKGR EKSVRAKAFS VPDSGNAKLK VQFFRFFKGD YWVVDLADDY SWAAVSTPTS
GSLWILSRTP YLQESVYDII IGRLVEKGFD TGRLVKTDQR G