Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1344 |
Symbol | |
ID | 6375022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1459194 |
End bp | 1459679 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642683841 |
Product | Lipocalin family protein |
Protein accession | YP_001959755 |
Protein GI | 189500285 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.861472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAA AACTATTCAG AAAAAAAACT GCTTCCAGAG AACCGGTGAC AGTTGATTCG GTTGATGTGG TTAGATACTG TGGCACATGG TATGAGATAG CTTCCTATGC ACCGAAAGAG GAACAGGGTT GCATTAAAAC AAAGGCAGAG TATACCCTTA ACAGAGAGGG GTATGTTGAT GTAAGAAACT CATGTAAGAA AAAGGGGAGG GAGAAATCAG TCAGAGCAAA GGCTTTCTCT GTTCCTGATA GCGGTAATGC AAAATTGAAG GTGCAGTTTT TCAGGTTTTT CAAAGGCGAT TACTGGGTTG TCGATCTTGC TGATGATTAT TCATGGGCTG CAGTTTCGAC TCCGACATCC GGAAGCCTGT GGATCCTGAG CAGAACGCCG TATCTACAGG AATCGGTTTA CGACATCATC ATCGGGAGGC TTGTCGAGAA GGGTTTTGAT ACGGGCAGGC TTGTAAAAAC TGATCAAAGG GGTTAG
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Protein sequence | MFKKLFRKKT ASREPVTVDS VDVVRYCGTW YEIASYAPKE EQGCIKTKAE YTLNREGYVD VRNSCKKKGR EKSVRAKAFS VPDSGNAKLK VQFFRFFKGD YWVVDLADDY SWAAVSTPTS GSLWILSRTP YLQESVYDII IGRLVEKGFD TGRLVKTDQR G
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