| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1339 |
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| Symbol | |
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| ID | 6375017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1453777 |
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| End bp | 1455087 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642683836 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001959750 |
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| Protein GI | 189500280 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.473224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAC CCGGTAAAAA ATTTTTCCAT ACGCTTTCAT TGCGATATCT GGTTTTCGCC
GGAATCCTTC TGGCTGTTCT TCTTCTGGCT GGATTGGCAG GTTTTATCGT CTATCACGGA
AGTTTGCAGA AGAAGGCTGA TGAGGCACAG ATGATATACA AGGATCTCCT TGACTTTCGT
TCATTACTGC ATATGGTGGA CCAGCAGTCG AGAACAGCCC CCGAGAATCC CGAAGTGATA
CAGGAGATTT CAAGGAACAC GAAATTGCTT CATTTTCGAT TGAGCAATCT GCAGACAAGG
GCTGAAAAAC TCCGGATGAA AGAGCTCACG TCGTGGATGA ATTCAAGGCA GAAAATGCTG
GGAACAATGC TTGCCGAGAG TGAGCGGAAA AAAGGTACCG GTGATGCTGT GATCCCGATG
ATCGCTCTTG AACTCGATGA TGTTGTCTTT CAGACAGCTA TCGAAGTCAG ACAGGCCGGC
CAAAGGGTAT ATGACACAGT ACAGCAATTT TTTTTCGTGG TTCTTTCGCT TCTTATTGCA
ATAATTATTT TTGCCGGCTG GCTTATTGTC AGTAACTACA GGCAGACGGT TATGCCGCTT
AATCAGCTTG CCGATAAACT CAGACTGTTG AACGAAGAGC TTCCTGAAAG TTTTCATGAT
ACAGCCGAAG AGGTAAAGAA GGACATCAGG CCGGATGAGT TCTCAAAAGA TGTCAACCAG
ATAACCGACT CGATTGTCCG GTTCTGCCAG AATATTGAAG TGAAGAATAA GAAGCTGGAT
GAACTGTTTA TCAAGGACGA AAAAACAAAT CTGTATAATT ATCGGCATTT TAAAGATCAC
CTGATCGTTG ATGTTGCAAG AGCGAAGCGT TTTGATGAAA AAGTTTCAAT TGCCATGATA
GATATCGATC GTTTCAAGGC ATATAATGAT GCCAATGGAC ATGTTGCCGG TGATATTGTT
CTTGAAAAAA TGGCGCGGAT AATCAGGGAA GAGTGTAGAG AGTCAGACAT TCCCGCCCGA
TTCGGTGGAG AGGAATTTGC AGTACTCTTT TCCCGGACTG ACAGTCGGAA AGCGATTGAA
ATAGTGGAAA GATTACGGAG CGTCATCGAG GCCGAACCGT TTTATCATGA GAAAGAGCTT
CCGGACGGGC AGCTGACCGT AAGCGCCGGT ATTGCGACGT GCCCTGACGA TGCGGCGGAC
TGGTATTCAC TTATAAATAA TGCGGACAAG GCGTTGTACC GCGCAAAGAA TACAGGTCGG
AACAGGGTTG TTCATTTTCG GGAACTTGCT GACCAGAACG GGAATCACTG A
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| Protein sequence | MSEPGKKFFH TLSLRYLVFA GILLAVLLLA GLAGFIVYHG SLQKKADEAQ MIYKDLLDFR
SLLHMVDQQS RTAPENPEVI QEISRNTKLL HFRLSNLQTR AEKLRMKELT SWMNSRQKML
GTMLAESERK KGTGDAVIPM IALELDDVVF QTAIEVRQAG QRVYDTVQQF FFVVLSLLIA
IIIFAGWLIV SNYRQTVMPL NQLADKLRLL NEELPESFHD TAEEVKKDIR PDEFSKDVNQ
ITDSIVRFCQ NIEVKNKKLD ELFIKDEKTN LYNYRHFKDH LIVDVARAKR FDEKVSIAMI
DIDRFKAYND ANGHVAGDIV LEKMARIIRE ECRESDIPAR FGGEEFAVLF SRTDSRKAIE
IVERLRSVIE AEPFYHEKEL PDGQLTVSAG IATCPDDAAD WYSLINNADK ALYRAKNTGR
NRVVHFRELA DQNGNH
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