| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1320 |
|---|
| Symbol | |
|---|
| ID | 6374998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1430459 |
|---|
| End bp | 1431043 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642683817 |
|---|
| Product | 5-formyltetrahydrofolate cyclo-ligase |
|---|
| Protein accession | YP_001959731 |
|---|
| Protein GI | 189500261 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
|---|
| TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.863729 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGG CTGAAAGCAA GGAACGTATC AGACGGGAGT GCAGGGAGCG TCGTGCTTCG
ATGGACAGTG AGGAGTGGCG GTCAGCAAGT AGTCTGATTG CTGAAAACGT CGCAGGAATT
CAAGAATTCC GCGAGGCTCG AACGGTCATG ATGTATCTGT CCATGAATGA ACGTCGTGAA
GTCGATACGG CCCCCCTGAT CTCTCTGTGC GCTTCTTTCG GGAATAGTTC CCTGTATGTG
CCGGTGACTC GCGGTGAAAC GCTTTGTATG GTGCCGTTTA ATGAGGGTGA CGAGGTGACC
GATGGCAGGT TCGGGCAGCC TGAACCGGTT TCAGACAACG GTTGTGCGGA TGTCCTGCCG
GACGTGGTCA TTCTTCCGGT GGTTGCCGTT GACAGGGAAG GGAGACGGCT CGGTTATGGA
AAAGGTTACT ATGATCGTTT TATCGCAGGG CTGAGACTGC AAGGTGCAAC GCCGTTCACG
CTCGCGGTGG CGTTTTCTTT TCAGCTTGTA TCGCACGTGC CTGAAGATCC GTGGGATGAA
AAAATTGATT GCGTGGTCAC CGAAAAAGAG GTGGTGAGGT TTTAG
|
|---|
| Protein sequence | MNKAESKERI RRECRERRAS MDSEEWRSAS SLIAENVAGI QEFREARTVM MYLSMNERRE
VDTAPLISLC ASFGNSSLYV PVTRGETLCM VPFNEGDEVT DGRFGQPEPV SDNGCADVLP
DVVILPVVAV DREGRRLGYG KGYYDRFIAG LRLQGATPFT LAVAFSFQLV SHVPEDPWDE
KIDCVVTEKE VVRF
|
|---|
| |