Gene Cphamn1_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1317 
SymbolpyrC 
ID6374995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1428020 
End bp1429342 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content54% 
IMG OID642683814 
Productdihydroorotase 
Protein accessionYP_001959728 
Protein GI189500258 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.898623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.947176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATAA TTTTCCAGAA CGCGAGACTC ATAAACCCGG CACAGAATCT TGACATGCAG 
GGCTCCATTA AGCTCTCTGA AACAGGAGTG ATCGATACGA TCACCTTTGG AGAAGAGACG
ATCCCTTCCG GCTCTCATGA CCGCGTCATC GACATGAGCG GTAAAATTAT CGCCTCAGGA
CTGTTCGACA TGCACTGCCA CTTCAGGGAA CCGGGTCAGG AATACAAGGA AACACTGGAA
ACCGGATCAA GAGCCGCGGT TGCAGGAGGA TTTACCGGAG TGGCCGTCAT GCCCAACACC
AAACCGGTCA TTGACAGTCC CCTTGGGGCC GCGTTTATCA AACTCAACGC AAAGGATCTG
CCGGTCGATA TCGAGATTGT TGCCGCAATG ACCGAGGGAA GCCAGGGAGA AACTCTTTCC
TCCTACGGCA AGCTCTCTTC CTATGGCATT TCATCTATTT CAGACGACGG AACCGCAGTA
CAGACGACCC GGATGATGCG ACTGGTGTTC GAATACGCCG CAAGTTTTGA CATGCTCGTC
ATTCAGCACT GCGAAGACAC CTCCCTCTCC AAAGAAGGCG TCATGAACGA AGGCGGATAC
TCGGCCCTGA TGGGCCTCAA GGGAATCCCT GACGTGGCAG AAGTCATTAC ACTCGCCAGA
GACATCCATC TGATCGACTA CCTGCAGAAG CACAAGCTCA ATCCGCCGAT ATCCCCTCCG
AGATACCACG TCGCGCATAT CAGTACAAAA GGCGCCCTGG ACCTGGTCCG TCAGGCCAGA
GCAAAAGGCA TGAAGATCAC CTGCGAAGTC ACGCCTCATC ACTTCACACT CACCGAGCAG
GACCTTTACG AAGCAGATAA CAAAGGCAAC TACATCATGA AACCGCCGCT CTGCAGCAGC
GAAAACCGGG ACGCTATTCT CGAAGCGCTT TCCGACGGCA CCATCGACGC CATAGCCTGC
GACCACGCCC CGCACGCGCG CCATGAGAAA GAGTGCCCCG CCGATCAGGT CGCCTTCGGT
ATCATCGGGC TCGAAACCTC CGTTGGCCTT ACCTTCTCAG AACTGGTACA TACAGGAAAA
ATCACCGACT ACAGAGCGAT CGAGCTGCTC TCCTCCAACC CGAGAAAAAT CATGGGCCTC
TCCCCCATAC GCTTCGAACC CGGCAGCCCG GCCAACTTCA CCTTCATCGA CCCCGAAGAA
ACCTGGACCT GCACCGAAGA CCTCATCCGT TCCAAATCAA GAAACACCCC CTTCCTCGGC
AGAACCATGA AAGGAAGAGC TGTGGGAATC TATCACAAGG GAATGCTGCA TGGATTGGAG
TAG
 
Protein sequence
MNIIFQNARL INPAQNLDMQ GSIKLSETGV IDTITFGEET IPSGSHDRVI DMSGKIIASG 
LFDMHCHFRE PGQEYKETLE TGSRAAVAGG FTGVAVMPNT KPVIDSPLGA AFIKLNAKDL
PVDIEIVAAM TEGSQGETLS SYGKLSSYGI SSISDDGTAV QTTRMMRLVF EYAASFDMLV
IQHCEDTSLS KEGVMNEGGY SALMGLKGIP DVAEVITLAR DIHLIDYLQK HKLNPPISPP
RYHVAHISTK GALDLVRQAR AKGMKITCEV TPHHFTLTEQ DLYEADNKGN YIMKPPLCSS
ENRDAILEAL SDGTIDAIAC DHAPHARHEK ECPADQVAFG IIGLETSVGL TFSELVHTGK
ITDYRAIELL SSNPRKIMGL SPIRFEPGSP ANFTFIDPEE TWTCTEDLIR SKSRNTPFLG
RTMKGRAVGI YHKGMLHGLE