| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1294 |
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| Symbol | trmD |
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| ID | 6374971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1406148 |
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| End bp | 1406861 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642683791 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001959706 |
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| Protein GI | 189500236 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0903602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.840113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACGT TGCGTATAGA TGTCATTTCC GTCATTCCCG GATTTTTTGA CTCACCACTC
GAAAAGGGTC TGCTGGGCAT AGCCGGAAAA AAAGAGCTTG TTGATATCCG GGTGCATAAT
CTTCATGATT ATGGGATTGG AAATTACAAG CAGGTTGATG ATTCCCCTTT TGGCGGGGGA
GCGGGGATGA TACTCAGGCC TGAACCGGTT TTTGAGTGTA TTGAAGGGCT TTTGGCTGAA
CGGTCGTATG ATGCGGTGAT TTTTCTGACT CCTGATGGAG AAAAGCTTGA TCAGCCGACA
GCAAACAGGC TTTCAGGGTT GAAAAATCTG ATTATATTGT GCGGGCATTA TAAAGCCGTT
GATGAAAGAA TCAGAAAAAA GCTGATCACC ATGGAATTGT CCGTAGGTGA TATAGTGGTT
TCAGGGGGAG AAATCCCGGC ACTGCTTTTG ATGGATGCGG TTGTCCGTCT GATTCCCGGG
GTTCTGGGTG ACAGTGAGTC TGCGCTGACA GATTCTTTTC AGACTGGAAT GCTGGATTCT
GCCTGGTATA CACGTCCCGC AGAATTCAGG GGAATGCGAG TTCCTGAGAT TCTGATGTCT
GGAGATCATA AGAAAATAGA GGAGTGGCGG AGTCGCAACG CCCTTGAGAG AACAGTGAAA
CGGCGCCCGG ATCTTCTTGA CGGTGATATT ATTGAAGAGC TAAAGAACAA CTAA
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| Protein sequence | METLRIDVIS VIPGFFDSPL EKGLLGIAGK KELVDIRVHN LHDYGIGNYK QVDDSPFGGG
AGMILRPEPV FECIEGLLAE RSYDAVIFLT PDGEKLDQPT ANRLSGLKNL IILCGHYKAV
DERIRKKLIT MELSVGDIVV SGGEIPALLL MDAVVRLIPG VLGDSESALT DSFQTGMLDS
AWYTRPAEFR GMRVPEILMS GDHKKIEEWR SRNALERTVK RRPDLLDGDI IEELKNN
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