| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1293 |
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| Symbol | |
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| ID | 6374970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1405506 |
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| End bp | 1406015 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642683790 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_001959705 |
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| Protein GI | 189500235 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000894981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.803159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAGG AATTCTATCT GGCTGGAAAA ATTCTTAAGC CGAAAGGTTT AAGGGGTGAG
GTGAAAATCC AGCCGGTTAC GGATTTTCCT GACAGTTATC TTGAGAGAAA GATTTTCTAT
GTCGGAAAAT CGGAAGAGGA GGCGGTTCGT CGCACAGTCC GTCAGGCAGC GTTGCGAAAA
GGTTTTGCCT ATCTTCTTTT TTCAGGTATC GATACCAGGG AGAAAGCTGA AGAAATCGTA
GGATTCAGTG TTTTTGTTCG TTCTGACGCA TTGATCCAGC TGCCTCCCGA CAGGGCTTAC
CTGCATGAAC TGAGAGGCTT GAAAGTGCTC AATGAGCGCC ATGAAGAGCT TGGCATTATA
GAGGATGTTC TGGGTATGCC TGCACATGAT GTCTATGAAA TACGCGCTGA AGGGGGTCTC
GTCTATGTGC CGGCGGTTGA AGAGTTTGTT GAGGAGATTT CTATCGATGA AGGGTATATG
GTGCTGAAGC GGTTTGAAGA GTTTCTCTGA
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| Protein sequence | MKEEFYLAGK ILKPKGLRGE VKIQPVTDFP DSYLERKIFY VGKSEEEAVR RTVRQAALRK
GFAYLLFSGI DTREKAEEIV GFSVFVRSDA LIQLPPDRAY LHELRGLKVL NERHEELGII
EDVLGMPAHD VYEIRAEGGL VYVPAVEEFV EEISIDEGYM VLKRFEEFL
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