| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1292 |
|---|
| Symbol | rpsP |
|---|
| ID | 6374969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1405093 |
|---|
| End bp | 1405497 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642683789 |
|---|
| Product | 30S ribosomal protein S16 |
|---|
| Protein accession | YP_001959704 |
|---|
| Protein GI | 189500234 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0228] Ribosomal protein S16 |
|---|
| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000777064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.783471 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTTAAAA TCAGACTGAG AAGAGCAGGA AGAAAAAAAT TACCTGTTTA CCAGATTGTT
GCAGCAGACG CTCGTGCGCC GAGGGACGGG AAATTTCTGG AAGTGATCGG CCACTATCAG
CCGACCGCCA AGCCCCATGC AATTACACTG GATAAGGAAC GTGTAGCGTA TTGGCTTGGA
GTGGGAGCGC AGCCGACCAC GACCGCGCAT AGTCTCATTC GCGCTACAGG GCTTCTTCAT
GAAATGAATA TGAAGCGTAA AGGGCGCAGC GAAGAGGAAA TTGCGGCTGA GATGGAACAA
TGGCAGGCTC GCCAGAATGA AAGACGCGAG AAAAGGCTTG CGATCAAAAC ACGTCGCCGT
CAGGCAAAAA AAGCAGCTGA GGCCGAGGGG CAGGAGAGTG CTTGA
|
|---|
| Protein sequence | MVKIRLRRAG RKKLPVYQIV AADARAPRDG KFLEVIGHYQ PTAKPHAITL DKERVAYWLG
VGAQPTTTAH SLIRATGLLH EMNMKRKGRS EEEIAAEMEQ WQARQNERRE KRLAIKTRRR
QAKKAAEAEG QESA
|
|---|
| |