| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1286 |
|---|
| Symbol | |
|---|
| ID | 6374963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 1398254 |
|---|
| End bp | 1398760 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642683783 |
|---|
| Product | protein of unknown function DUF192 |
|---|
| Protein accession | YP_001959698 |
|---|
| Protein GI | 189500228 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1430] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.764739 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA AAACAAAAAT AATCACACAA GCAATATCAA TCATGTTAAT CATGAATCTT
TTGTCGTGTT ATACGTCGAC TTATCAGGAT GATAAACACA ATAAAATCTC TCAGGTAAGA
ATAAATAGTG AACGGATTTC GGTTGAAATA GCGGATTCAG ATGAAGAAAT ATCAAGAGGC
TTGATGTGGA GAAAAACGCT TGATAGAGAG AAGGGAATGC TGTTCATCTA TCCTGATAAT
GCCGTCAGGT ATTTCTGGAT GAAAAACACC TATATCAAGC TTGATATGGC ATTCATTGAC
GCAAACCATG TAATAAGAAC AATTCATACA GCCGACAGGA TCGGTGATGA GAAGACGCTC
TACAGCTCTC TTGTCCCTGT TCAATACGTT CTTGAAGTAA ACGCAGGCTG GTTTAAACAG
CATAATATCG GGATCGGCGA TACCGTTTAT TTCGATACCA TGCCTTCAGT TCATATCGAC
ACTTGCAGAA TTAATCAGAA CAACTGA
|
|---|
| Protein sequence | MKHKTKIITQ AISIMLIMNL LSCYTSTYQD DKHNKISQVR INSERISVEI ADSDEEISRG
LMWRKTLDRE KGMLFIYPDN AVRYFWMKNT YIKLDMAFID ANHVIRTIHT ADRIGDEKTL
YSSLVPVQYV LEVNAGWFKQ HNIGIGDTVY FDTMPSVHID TCRINQNN
|
|---|
| |