Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1282 |
Symbol | |
ID | 6374959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1396272 |
End bp | 1396892 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642683779 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_001959694 |
Protein GI | 189500224 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.536618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.780941 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAC AAGACATACT CTGCTGTATC ACCGCCGACT CCCTCTGCCC GGTTTTACAG GCGGAAAAAG CGCTTGGCGG GGGCGCTTCA ATGATTCAGC TGCGAAACAA ATCGGCCTCC GGAGCTGATC TCTACAGCTG GGCAAAGCGA ATAAAAAAAC TGTGTCAGGC GCACGATGCG ACATGCATCA TCAACGACCG GCTTGATATC GCTCTTGCCG TCGAAGCAGA CGGAGTCCAC CTCGGACAGG GCGACTTACC TGCAGATGCA GCGAGAAAAC TGCTTGGAAG CAAAAGGATA CTCGGTGTCT CTGTCGCTTC GGTTGACGAA GCGAAAAAAG CAGTTGCCTC CGGAGCTGAT TATCTTGGTC TCGGGCACAT CTTTCCTACT GTGTCAAAAC ATAAATCATC TGAACCGATA GGCCTTGAAC GCATTGCAGA GGTCACAAAG ACGATCAGCA TACCGGTTAT CGCTATTGGA GGCATTACAG AAAATAGTGT CTGTGCTGTA CTGCGTGCCG GAGCTTCCGG AATCGCCGTG ATTTCCTCGG TGGCACATGC CCCTGACCCT GAAAACGCGG CAGCTTCTCT CACCAAAAAA ATACAGGCAT GCCGACAGTA G
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Protein sequence | MKQQDILCCI TADSLCPVLQ AEKALGGGAS MIQLRNKSAS GADLYSWAKR IKKLCQAHDA TCIINDRLDI ALAVEADGVH LGQGDLPADA ARKLLGSKRI LGVSVASVDE AKKAVASGAD YLGLGHIFPT VSKHKSSEPI GLERIAEVTK TISIPVIAIG GITENSVCAV LRAGASGIAV ISSVAHAPDP ENAAASLTKK IQACRQ
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