Gene Cphamn1_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1282 
Symbol 
ID6374959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1396272 
End bp1396892 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content52% 
IMG OID642683779 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_001959694 
Protein GI189500224 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.536618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.780941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC AAGACATACT CTGCTGTATC ACCGCCGACT CCCTCTGCCC GGTTTTACAG 
GCGGAAAAAG CGCTTGGCGG GGGCGCTTCA ATGATTCAGC TGCGAAACAA ATCGGCCTCC
GGAGCTGATC TCTACAGCTG GGCAAAGCGA ATAAAAAAAC TGTGTCAGGC GCACGATGCG
ACATGCATCA TCAACGACCG GCTTGATATC GCTCTTGCCG TCGAAGCAGA CGGAGTCCAC
CTCGGACAGG GCGACTTACC TGCAGATGCA GCGAGAAAAC TGCTTGGAAG CAAAAGGATA
CTCGGTGTCT CTGTCGCTTC GGTTGACGAA GCGAAAAAAG CAGTTGCCTC CGGAGCTGAT
TATCTTGGTC TCGGGCACAT CTTTCCTACT GTGTCAAAAC ATAAATCATC TGAACCGATA
GGCCTTGAAC GCATTGCAGA GGTCACAAAG ACGATCAGCA TACCGGTTAT CGCTATTGGA
GGCATTACAG AAAATAGTGT CTGTGCTGTA CTGCGTGCCG GAGCTTCCGG AATCGCCGTG
ATTTCCTCGG TGGCACATGC CCCTGACCCT GAAAACGCGG CAGCTTCTCT CACCAAAAAA
ATACAGGCAT GCCGACAGTA G
 
Protein sequence
MKQQDILCCI TADSLCPVLQ AEKALGGGAS MIQLRNKSAS GADLYSWAKR IKKLCQAHDA 
TCIINDRLDI ALAVEADGVH LGQGDLPADA ARKLLGSKRI LGVSVASVDE AKKAVASGAD
YLGLGHIFPT VSKHKSSEPI GLERIAEVTK TISIPVIAIG GITENSVCAV LRAGASGIAV
ISSVAHAPDP ENAAASLTKK IQACRQ