| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1274 |
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| Symbol | secA |
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| ID | 6374951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1384400 |
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| End bp | 1387489 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642683772 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001959687 |
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| Protein GI | 189500217 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.128332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.146053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAA TTTTTGAAAA GGTATTTGGC TCAAAGCACG ACAAGGACAT AAAAAAAATC
AAGCCTCTCG TTGATGAAAT CAATGAAATC TACGCGACAT TCGCTTCCCT CAGTGACGAT
CAGCTCAGAG CGAAAAGCAT GGCCCTCAAA TCAAACCTGC AAGAGGAACT AACCCTGATC
AGGCAGCAGA ACAGCGATCT TTCCGGCAAG CTCGAGAACC CTGACATAAC CATCAGTCAG
ATAGAAAGCA TCAACAGGGA GCTGGATGAA CTGGAAAAGA AATACGAAGA AGAAACTGCC
GCCGCTCTTG AGAAAATTCT GCCCGAAACA TTCGCCATCG TAAAAGATAC CTGCAGAAGG
CTCAAAGGGC ACACCTACCA GGTCATGGAT CATACCATGA CCTGGGACAT GATCCCCTAT
GACGTCCAGC TGCTTGGAGG CATTGTCCTG CACCAGGGAA AAGTCACCGA GATGGCCACG
GGTGAAGGAA AAACCCTGGT CTCAACCCTG CCGGCATTTC TTAACGCCCT TACAGGAAGA
GGCGTGCATA TCGTTACCGT CAATGACTAT CTGGCGCAGC GTGACAGGGA GTGGATGAGC
CCTGTTTTCG AATTTCACGG CATTGAAACC GGGGTCATCC TCAGCGGTAT GCGCCCGGAA
GAAAGAAAAA AAGAGTACGC CTGCGACATA ACCTACGGCA CAAACAACGA GTTCGGCTTC
GACTATCTTC GTGACAACAT GGCCGGATCT CCCGCAGATC TTGTCCAGAA GGAATATTAC
TACGGGATTG TCGATGAAGT AGACAGTGTC CTGATCGATG AAGCAAGAAC GCCTTTGATC
ATTTCAGGAC CGGTACCCAA TGCGAATACC AGCAAGTTTA CCGAAATCAA ACCCTGGATG
GAACGCCTGG TAAAAAACCA GCAGAATCTG GTTGCAGGGT ATCTTGCTGA AGCCGAAAAA
GTCGTCAAGG AGAAACCCAA CGACTTTCAG GCGGCTCTTG CTCTTCTGCG GGCAAAAAGA
GGCCAGCCCA AGAACACCCG CCTGATCAAA ATGCTGTCCC AGACAGGCAT GGCAAAGCTC
ATGCAGAGCG CGGAAAACGA ATATCTCAAG GATAATTCGA GAAGAATGCA TGAAGTGGAC
GACGAACTCT ACTTTTCTAT CGATGAGAAA TCAAACGCTA TCGATCTGAC CGACAAGGGA
CGGGATTTTC TCAGCAAACT GAGCAATCAG GACAGCGATC TCTTTCTTGT CCCTGACGTA
GGCGCGGAGA TTGCCGCCAT TGAAAGCGAC GAGGCCCTCG ATACAGAGCA GAAAATCAAG
AAAAAAGACG AGGTATACAG GCTCTTTTCT GACCGTTCTG AAAAACTGCA TAACATCAGC
CAGCTTCTCA AGGCGTATTC ACTCTTCGAA AAAGACGACG ATTATGTTGT ACAGAACGGA
CAGGTCATGA TCGTCGATGA ATTTACCGGC CGCATACTTC CCGGAAGACG ATACAGCGAC
GGTCTCCATC AGGCGATCGA AGCAAAAGAA AACGTCAAAA TCGAGGGAGA GACCCAGACC
CTCGCAACCA TCACCATTCA GAATTTTTTC CGCCTGTACA AAAAACTCTC AGGTATGACA
GGCACGGCTG AAACCGAATC AGCTGAGCTT TTCGATATTT ACAAGCTTGA TGTGGTGGTC
ATTCCGACCA ACAGGCCGAT TATCCGGAAA GACCAGGATG ATTACGTCTA CAAGACGCGA
AAAGAAAAAT ATGCCGCCAT CATCGGCAAG ATCATCGAGC TACAGAAAAA GGGCCAGCCT
GTGCTGGTTG GTACAGCCAG CGTCGATGTA TCGGAAACGC TTTCAAGAAT GCTCCGGGCA
AAAAAAATCA CGCACAATGT CCTGAACGCC AAGCAACATG GTCGGGAAGC GGAAATTGTC
GCTTCGGCAG GTCAGAACGG CGCGGTAACC ATCGCCACAA ACATGGCCGG GCGCGGCACT
GATATCAAGC TCGGTGAAGG GGTAAAAGAG CTGGGGGGAC TATATATTCT TGGTTCGGAA
AGACATGAGT CACGAAGAAT CGACCGGCAG CTTCGAGGCC GCTCCGGACG ACAGGGCGAT
CCCGGTGAAT CCATATTCTA TGTCTCTCTT GAAGACAACC TGATGCGTCT GTTCGGTTCG
GACAGGGTGA TCTCCATCAT GGACAAACTC GGGCATGAAG AAGGCGATGT CATTGAACAT
TCAATGGTCA CCAAGTCGAT CGAACGAGCA CAGAAAAAAG TTGAGGAACA GAATTTCTCC
ATACGTAAGC GACTGCTCGA ATATGACGAC GTCCTTAACC AGCAACGCGA CGTCATCTAC
AAACGTCGGA AGGGGGCCCT CACGAAAAAA CGTCTTACAG CAGATATTTT TGACCTGCTG
CATGACTATT CGGAAAACAC CGTCAACCAG TACGCAAGGG AATTTGATGT CAAGGGGCTT
GAAGAACAGG TTCTCAGGGA CCTCTCGGTA GAGTTCAGGA TAGAGAGCAT AACATTTGAA
AATGAAGGCG TTGAAAAAAC CGCTGAACAA CTCTACAAAG CCGCTCTCGA ATTCTATAAA
CGAAAGGAGG ATGTCGTCCC GGAAGAGATC ATGGGCCAGA TTGAAAAATA TGCCGTGCTG
AACGTCATTG ATCAGAAATG GAGAGAACAT CTCAGAGAGA TCGATTCCCT GAAAGAGGGG
ATCAACCTGA GAGCCTACGG TCAGAAGGAC CCGCTTCTCG AATACAAACA GGAAGCCTAC
AAGCTTTTTG TCTCCATGCT CGGAGAGATC GAGCATGAAA CCCTCTCGCT CGCCTTCAAG
CTGTTTCCCG TGACGGAAGA AGCAAGGGAA AAGATCGAAC AGGAGCAGAA AAAGTCGCAG
GTTCAGCAGG ACCGGCTTGT CGCGCGTCAT GAAAAGGCTG AAACAGCCTA TGAAAATTCC
GGATCACGCC CTGAAGGTCG TCAGGAAAAG AAGGCTGAGA ATGGAAAAGA GCCCTTGCAG
CAACCGGTAA TAGCCGACAA GACACCTGGC AGAAACGATC CCTGCTCATG CGGAAGCGGA
AAAAAATACA AAAACTGCTG CGGCAAGTAA
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| Protein sequence | MLKIFEKVFG SKHDKDIKKI KPLVDEINEI YATFASLSDD QLRAKSMALK SNLQEELTLI
RQQNSDLSGK LENPDITISQ IESINRELDE LEKKYEEETA AALEKILPET FAIVKDTCRR
LKGHTYQVMD HTMTWDMIPY DVQLLGGIVL HQGKVTEMAT GEGKTLVSTL PAFLNALTGR
GVHIVTVNDY LAQRDREWMS PVFEFHGIET GVILSGMRPE ERKKEYACDI TYGTNNEFGF
DYLRDNMAGS PADLVQKEYY YGIVDEVDSV LIDEARTPLI ISGPVPNANT SKFTEIKPWM
ERLVKNQQNL VAGYLAEAEK VVKEKPNDFQ AALALLRAKR GQPKNTRLIK MLSQTGMAKL
MQSAENEYLK DNSRRMHEVD DELYFSIDEK SNAIDLTDKG RDFLSKLSNQ DSDLFLVPDV
GAEIAAIESD EALDTEQKIK KKDEVYRLFS DRSEKLHNIS QLLKAYSLFE KDDDYVVQNG
QVMIVDEFTG RILPGRRYSD GLHQAIEAKE NVKIEGETQT LATITIQNFF RLYKKLSGMT
GTAETESAEL FDIYKLDVVV IPTNRPIIRK DQDDYVYKTR KEKYAAIIGK IIELQKKGQP
VLVGTASVDV SETLSRMLRA KKITHNVLNA KQHGREAEIV ASAGQNGAVT IATNMAGRGT
DIKLGEGVKE LGGLYILGSE RHESRRIDRQ LRGRSGRQGD PGESIFYVSL EDNLMRLFGS
DRVISIMDKL GHEEGDVIEH SMVTKSIERA QKKVEEQNFS IRKRLLEYDD VLNQQRDVIY
KRRKGALTKK RLTADIFDLL HDYSENTVNQ YAREFDVKGL EEQVLRDLSV EFRIESITFE
NEGVEKTAEQ LYKAALEFYK RKEDVVPEEI MGQIEKYAVL NVIDQKWREH LREIDSLKEG
INLRAYGQKD PLLEYKQEAY KLFVSMLGEI EHETLSLAFK LFPVTEEARE KIEQEQKKSQ
VQQDRLVARH EKAETAYENS GSRPEGRQEK KAENGKEPLQ QPVIADKTPG RNDPCSCGSG
KKYKNCCGK
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