Gene Cphamn1_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1267 
Symbol 
ID6374944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1375832 
End bp1377046 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content50% 
IMG OID642683765 
Productaspartate aminotransferase 
Protein accessionYP_001959680 
Protein GI189500210 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0259449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATG AAATAGAATT TGAAAAGATT AAGCGGCTTC CGAAATATGT TTTTGCTGCC 
GTTGATGAAC TGAAAATGGC TGAAAGGCGT GCAGGAGAGG ATGTTATAGA TTTTTCTATG
GGAAACCCGG ACGGCCCGAC ACCGCAGCAT ATTATCGACA AGCTCGTTGA AAGCGTTCAG
AAACCCAGAA CGCACGGCTA TTCTGTTTCC AAAGGTATTT ACAAGCTTCG TCAGGCCATC
TGCGGATGGT ATCTAAGGAG ATTCGGGGTG GAACTCGATC CAGATACTGA AGTGGTCGCT
TCGATGGGTT CGAAGGAGGG GTATGTCAAC CTCGTTCAGG CGATCATCAA CCCCGGTGAT
GTGGCTATGG TGCCGGATCC CTGTTATCCT ATTCATTCAC AGGCGTTTAT TCTTGCAGGC
GGCAATGTTC ACCGGTTCAA ACTGGTTTTC AGAGATGATT TTACGCTGGA TGAGGACGCG
TTTTTTCGAA ATATCGAAAA GGCGATACGT GAATCCTCTC CCAAGCCGAA ATATCTTGTC
GTGAATTTTC CCAACAACCC TACAACAGTC ACCGTCGAGC TTTCTTTTTA TGAAAAGCTG
GTCGCTCTGG CGCGAAAGGA GCGCTTTTAC ATCATCAGTG ATATCGCCTA TGCTGAAATC
ACGTTCGACG GATACCGGGC GCCCTCTATC CTTCAGGTTC CCGGAGCCAA AGATGTTGCT
ATAGAAAGCT ATACGCTTTC GAAAACATAT AATATGGCCG GCTGGCGGGT AGGCTTTCTC
GCAGGAAATC CGAAACTTGT CGGAGCGCTG ATGAGAATAA AAAGCTGGCT TGATTATGGC
ATGTTCACCC CGATACAGGT GGCATCCACC ATCGCGCTGA ACGAAAGCCA GGAGTGTGTG
GGCGAGATCC GGGATACCTA TCAGCGACGC CGGGATGTTC TCGTGAAAAG CTTTGCAAAC
GCGGGCTGGG AGATGCAGCA GCCAAAGGCA TCGATGTTTG TCTGGGCAAG AATCCCTGAG
CCGTTCAGGG AACGTGGCAG TCTCGAGTTC AGCAAAATGC TTCTTAAAGA GGCAAAAATT
GCCGTAAGCC CCGGCATCGG TTTCGGCACT TACGGGGATG AGTATGTCAG AATCGCCCTG
ATTGAAAACG AGGAGAGAAT CCGCCAGGCG GCACGCAATG TCAGAAAGTT TCTTCGGTCA
CACGGATGTG GCTGA
 
Protein sequence
MFDEIEFEKI KRLPKYVFAA VDELKMAERR AGEDVIDFSM GNPDGPTPQH IIDKLVESVQ 
KPRTHGYSVS KGIYKLRQAI CGWYLRRFGV ELDPDTEVVA SMGSKEGYVN LVQAIINPGD
VAMVPDPCYP IHSQAFILAG GNVHRFKLVF RDDFTLDEDA FFRNIEKAIR ESSPKPKYLV
VNFPNNPTTV TVELSFYEKL VALARKERFY IISDIAYAEI TFDGYRAPSI LQVPGAKDVA
IESYTLSKTY NMAGWRVGFL AGNPKLVGAL MRIKSWLDYG MFTPIQVAST IALNESQECV
GEIRDTYQRR RDVLVKSFAN AGWEMQQPKA SMFVWARIPE PFRERGSLEF SKMLLKEAKI
AVSPGIGFGT YGDEYVRIAL IENEERIRQA ARNVRKFLRS HGCG