Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1267 |
Symbol | |
ID | 6374944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1375832 |
End bp | 1377046 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642683765 |
Product | aspartate aminotransferase |
Protein accession | YP_001959680 |
Protein GI | 189500210 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0259449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGATG AAATAGAATT TGAAAAGATT AAGCGGCTTC CGAAATATGT TTTTGCTGCC GTTGATGAAC TGAAAATGGC TGAAAGGCGT GCAGGAGAGG ATGTTATAGA TTTTTCTATG GGAAACCCGG ACGGCCCGAC ACCGCAGCAT ATTATCGACA AGCTCGTTGA AAGCGTTCAG AAACCCAGAA CGCACGGCTA TTCTGTTTCC AAAGGTATTT ACAAGCTTCG TCAGGCCATC TGCGGATGGT ATCTAAGGAG ATTCGGGGTG GAACTCGATC CAGATACTGA AGTGGTCGCT TCGATGGGTT CGAAGGAGGG GTATGTCAAC CTCGTTCAGG CGATCATCAA CCCCGGTGAT GTGGCTATGG TGCCGGATCC CTGTTATCCT ATTCATTCAC AGGCGTTTAT TCTTGCAGGC GGCAATGTTC ACCGGTTCAA ACTGGTTTTC AGAGATGATT TTACGCTGGA TGAGGACGCG TTTTTTCGAA ATATCGAAAA GGCGATACGT GAATCCTCTC CCAAGCCGAA ATATCTTGTC GTGAATTTTC CCAACAACCC TACAACAGTC ACCGTCGAGC TTTCTTTTTA TGAAAAGCTG GTCGCTCTGG CGCGAAAGGA GCGCTTTTAC ATCATCAGTG ATATCGCCTA TGCTGAAATC ACGTTCGACG GATACCGGGC GCCCTCTATC CTTCAGGTTC CCGGAGCCAA AGATGTTGCT ATAGAAAGCT ATACGCTTTC GAAAACATAT AATATGGCCG GCTGGCGGGT AGGCTTTCTC GCAGGAAATC CGAAACTTGT CGGAGCGCTG ATGAGAATAA AAAGCTGGCT TGATTATGGC ATGTTCACCC CGATACAGGT GGCATCCACC ATCGCGCTGA ACGAAAGCCA GGAGTGTGTG GGCGAGATCC GGGATACCTA TCAGCGACGC CGGGATGTTC TCGTGAAAAG CTTTGCAAAC GCGGGCTGGG AGATGCAGCA GCCAAAGGCA TCGATGTTTG TCTGGGCAAG AATCCCTGAG CCGTTCAGGG AACGTGGCAG TCTCGAGTTC AGCAAAATGC TTCTTAAAGA GGCAAAAATT GCCGTAAGCC CCGGCATCGG TTTCGGCACT TACGGGGATG AGTATGTCAG AATCGCCCTG ATTGAAAACG AGGAGAGAAT CCGCCAGGCG GCACGCAATG TCAGAAAGTT TCTTCGGTCA CACGGATGTG GCTGA
|
Protein sequence | MFDEIEFEKI KRLPKYVFAA VDELKMAERR AGEDVIDFSM GNPDGPTPQH IIDKLVESVQ KPRTHGYSVS KGIYKLRQAI CGWYLRRFGV ELDPDTEVVA SMGSKEGYVN LVQAIINPGD VAMVPDPCYP IHSQAFILAG GNVHRFKLVF RDDFTLDEDA FFRNIEKAIR ESSPKPKYLV VNFPNNPTTV TVELSFYEKL VALARKERFY IISDIAYAEI TFDGYRAPSI LQVPGAKDVA IESYTLSKTY NMAGWRVGFL AGNPKLVGAL MRIKSWLDYG MFTPIQVAST IALNESQECV GEIRDTYQRR RDVLVKSFAN AGWEMQQPKA SMFVWARIPE PFRERGSLEF SKMLLKEAKI AVSPGIGFGT YGDEYVRIAL IENEERIRQA ARNVRKFLRS HGCG
|
| |