| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1254 |
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| Symbol | |
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| ID | 6374931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1359762 |
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| End bp | 1360496 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642683752 |
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| Product | CRISPR-associated RAMP protein, Csm3 family |
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| Protein accession | YP_001959667 |
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| Protein GI | 189500197 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02582] CRISPR-associated RAMP protein, Csm3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00320437 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGAAGC TTATCGGAAA GGTTCGTCTG TCCGGCAGGA TAAAGGCTGA AACCGGACTT
CATATAGGGG GTTCAAAAAC GGCTTTGGAT ATTGGTGGAA TTGACCTGAA TGTCATCAAA
ACTCCTGGGG GAGTGCCGTT TATTCCCGGC AGCTCTCTGA AAGGCAAGCT GCGTTCGATT
CTTGCTCGTG AGCATGGTTC TATGGCAATC AGTAAAAAAG AAAAAGGTGT CAGGGATGGT
GACACAACTG ACGAAGACAT TCCAATCATC ATAGAGCTGT TTGGAAATGC TGGAGACAAA
AAGGATGCTT GTCCTTCGAG AATTATTGTA AGAGATGCTT TTCTCGATAA AGAGTTCTTT
AATGATCCCG TGAAAAACGA AGGGATTTTC AGTGAACTTG AAATGGATTA TACGGAGAGC
AAGTGGGAAA ATACCATTTT GCGAAAGACT GGAACAGCAA TAAACCCTCG TCCTGTCGAG
CGGGTTCCAG TAGGAACAAA ATTTGATTTT GAAATCATTT ATAATGTGTT CAATGACGAC
AAAAAAAAGC TGCATCTGAA TGAGATCATC AAAGCATTAC GAATTCTTGA AGATGATTAT
CTCGGTGGTC TGGGGTCACG TGGCTATGGA AAAATCAGTT TTCCAAGAGA ATTCATGCAA
TACAGCTACA AGTCTATCGA GAACTACAAG AACGGCGATG ATTGGCAAGA GTTAACCGGT
ATTGAAACAC TATAA
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| Protein sequence | MQKLIGKVRL SGRIKAETGL HIGGSKTALD IGGIDLNVIK TPGGVPFIPG SSLKGKLRSI
LAREHGSMAI SKKEKGVRDG DTTDEDIPII IELFGNAGDK KDACPSRIIV RDAFLDKEFF
NDPVKNEGIF SELEMDYTES KWENTILRKT GTAINPRPVE RVPVGTKFDF EIIYNVFNDD
KKKLHLNEII KALRILEDDY LGGLGSRGYG KISFPREFMQ YSYKSIENYK NGDDWQELTG
IETL
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