Gene Cphamn1_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1240 
Symbol 
ID6374917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1345527 
End bp1346828 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content47% 
IMG OID642683738 
Producthypothetical protein 
Protein accessionYP_001959653 
Protein GI189500183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00997974 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0297929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAAACG CTAAACATGA CAGACTCGCG ATCGAGCCCG GAGCGATTGT GAGGATCTAT 
CTTTCCGTGT CAGTCTTTAT CATCACTGCA GCAGCATTTC TCGGAGCAGC AGGGGCATGG
ACAGGAAGTC TGTTTCTCGA TACGGTACAT CCCTATGTGT TTTTTACGGG ATTCGGCAAT
CTGGCGATCA TAATCCTTAA CCGTTACCTG ATCTCCGCAA TCTATCCCGA GCTTGAGATC
GATCCGGAAA AGCAGATCCG CGCTATCTAC GGGGTGCTGC TCTCTGTGTT GCTTGTTTTT
GTCGCGGTAG CTATGGAGTG GCCGTTACTC AAGGCTGCAG TCGGGCTTTT TCTTATCATC
ATTGTCTTAT CTGCCGCGAG GGAGATATTT TCGACACTTT CGATCGGGAA AATCTGGCAG
GAGGTTTCTG TCCGGTACTA TATCTTTGAT GTGCTCTTTC TGCTTGTCGC CAATCTGGGG
CTTTTTACTC TGGGGCTCAA GGAGACCTTT CCGGAATCAG GTGTTATACC ATTTTTTGTT
ACCCAGTCAA CCTATTTTCT CGGTTCCTCC TTTCCTCTGA GCATAAGCGT CATGGGCTTT
CTCTATGCAT ATGTATGGCG CCGTTCTTCA GGAAAAGAAT GGATCAGAAA GCTATTCAGT
ATATGGTTCT ACATTTTCGT CGGAGGGGTG CTTGTTTTTC TTGTGGCGAT TCTGATGGGA
AATTATTTGG GTATGATGCT TGTCAGTCAT ACGCTCATGC TGGGAGTTCT TGCTCTCCTT
GTCGGCTTTG CCCGTTATCT GTACGGTTTT TTTGCCAGGC AATTTCATCA TCCCGCGCTC
GCCTTTCTGC TTTCAGGGCT TGCAATGCTG CTTGCCGCAA GCGCATTCGG GATACTGAAT
ATCTTCTATT TTGATCATTT CGGCGCAAGA CCTCCCATTC CCCCGGATAG AATGTGGATC
TATCATTCGC ATACCCACGC AGCGCTTCTG GGATGGATAT CCCTTTCGTT TACGGGTATG
ATCTACATTG TTGTCCCTGC AATCGCAAAG GCCAATTCTC TCGAACTGCT TCGTTCTGAA
AAAGCTCTTT CGCAATTGCT GGATGAAAAA ACACTTTCAA GAGCGTTCCG GCAACTGACC
ATCGCCGTGG TCTCGGCAAC TGCGATCCTT CTCGCGTTTT ATCTGCATAA CGATGTTTTA
CTTGCCGTTG GAGGGGTGGT GTATGGACTT GCTGTATTCT ATTCAAGGGG TAATCTGGCA
AAAGCATCTA AAAGTGAAAA CCGAAAAAAA GGGAACCTAT GA
 
Protein sequence
MQNAKHDRLA IEPGAIVRIY LSVSVFIITA AAFLGAAGAW TGSLFLDTVH PYVFFTGFGN 
LAIIILNRYL ISAIYPELEI DPEKQIRAIY GVLLSVLLVF VAVAMEWPLL KAAVGLFLII
IVLSAAREIF STLSIGKIWQ EVSVRYYIFD VLFLLVANLG LFTLGLKETF PESGVIPFFV
TQSTYFLGSS FPLSISVMGF LYAYVWRRSS GKEWIRKLFS IWFYIFVGGV LVFLVAILMG
NYLGMMLVSH TLMLGVLALL VGFARYLYGF FARQFHHPAL AFLLSGLAML LAASAFGILN
IFYFDHFGAR PPIPPDRMWI YHSHTHAALL GWISLSFTGM IYIVVPAIAK ANSLELLRSE
KALSQLLDEK TLSRAFRQLT IAVVSATAIL LAFYLHNDVL LAVGGVVYGL AVFYSRGNLA
KASKSENRKK GNL