Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1238 |
Symbol | |
ID | 6374915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1344227 |
End bp | 1344982 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642683736 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_001959651 |
Protein GI | 189500181 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0205293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.236191 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTT TCGGAAAAAA AACAGGTCTT TCCGGCGGGA GTGATGCCAG AAAGGGAATA GAAAAAGTCG CACGTCCGGA GGCGTTTACC ATCAGGGTTG ACCCGCAGAA GTTCAATCTT GCGACAAAGC CTCAGGGGCC GGTGCATGAG CAGCTTGAAA CATTGAGACA GAAGCTGACC AAGCTCTCGT CCAATGTCGA GAACAATCTG ATGCTTGTCA TTCGGGCATC AACCAAAAAA AACAGTGATC TTGCCCAGTC CGCGTTTGAT TTTGACAAGG AGTATATTCA GAAAGGAAAG TTCGAGGTAG AGTACCTCTG TCTCGCATAC AGCTTTTTTC AGGCTCTTGA CGAGGGAGAT AAAAAGGTTG TCGATCTTGC CCGTGAGATC ATGCGGAAAC TGGAGACAAT CGGACAGTAC GCATTGAATA TCGCCGTCAA GACGGAATTC ATTCAGCTTG CAAATATTGA AATCCTGCAC AAGGACGAGT ATGATCTCAA GCCGATGGGC GATATCACGG CGGAGATGAT CAAGAAAGCG GTCGAGGCGT TCGTGAGCGG AAACAGCAAG CATGCGACAG AAACGCTCGA CATGATGAAA GAGATCGATG AGATCTATGA AAAAGCGGTT ATTAAGCTCA GGGGAGAGGT CAATGACGAG AATATCACCA ACTATACCGG AATTCTGTCC GTTGTCGAGC ATGTGAAAAT GTCCGCAGAC TTGTCATGCG ATATAGCGCG AATGCTTACA GACTGA
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Protein sequence | MKIFGKKTGL SGGSDARKGI EKVARPEAFT IRVDPQKFNL ATKPQGPVHE QLETLRQKLT KLSSNVENNL MLVIRASTKK NSDLAQSAFD FDKEYIQKGK FEVEYLCLAY SFFQALDEGD KKVVDLAREI MRKLETIGQY ALNIAVKTEF IQLANIEILH KDEYDLKPMG DITAEMIKKA VEAFVSGNSK HATETLDMMK EIDEIYEKAV IKLRGEVNDE NITNYTGILS VVEHVKMSAD LSCDIARMLT D
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